| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is hisE
Identifier: 99081882
GI number: 99081882
Start: 2148721
End: 2149038
Strand: Direct
Name: hisE
Synonym: TM1040_2042
Alternate gene names: 99081882
Gene position: 2148721-2149038 (Clockwise)
Preceding gene: 99081881
Following gene: 99081888
Centisome position: 67.13
GC content: 59.75
Gene sequence:
>318_bases ATGACCTTGCTGCACGACCTCGAACAGACCATTCTGTCCCGCAAGGGCACCGATCCCGACACCAGCTGGACCGCGAAGCT CTTGTCCAAGGGGCCGGAGAAATGCGCCGAAAAATTTGGCGAAGAAGCCATCGAAGCCATCATCGAAGCGGTGAAGGACG ACAAAGCCAAGCTCGCCTCTGAGGGCGCGGATGTGCTCTACCATTTTCTGGTGATGCTGGCAGCGCGGGATGTGGCGTTG GACGATGTTCTGACTGTGCTTGCTGAGCGGCAGGGTCTGAGCGGCCTTGCGGAGAAAGCCGCCCGTCCCAAAGGCTAG
Upstream 100 bases:
>100_bases CCAGCGCGGTGCTGGCGGCCTCGATCTTCCACTTTGGCGAATACACGGTGCAAGAAGCCAAGGAACACATGATCGCCAAT GGCATCCCGATGAGGCTCCA
Downstream 100 bases:
>100_bases GCGCAAAAGCGTCGGGGCCAAGCGCGCGGCCCAAAGCGGACCGAGTGCAAAGCCGCCTATTCCACGGCCCAGATCACCCT CTGCAGACCCGCGAGTCGTG
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTLLHDLEQTILSRKGTDPDTSWTAKLLSKGPEKCAEKFGEEAIEAIIEAVKDDKAKLASEGADVLYHFLVMLAARDVAL DDVLTVLAERQGLSGLAEKAARPKG
Sequences:
>Translated_105_residues MTLLHDLEQTILSRKGTDPDTSWTAKLLSKGPEKCAEKFGEEAIEAIIEAVKDDKAKLASEGADVLYHFLVMLAARDVAL DDVLTVLAERQGLSGLAEKAARPKG >Mature_104_residues TLLHDLEQTILSRKGTDPDTSWTAKLLSKGPEKCAEKFGEEAIEAIIEAVKDDKAKLASEGADVLYHFLVMLAARDVALD DVLTVLAERQGLSGLAEKAARPKG
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=89, Percent_Identity=39.3258426966292, Blast_Score=73, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_SILST (Q1GEZ2)
Other databases:
- EMBL: CP000377 - RefSeq: YP_614036.1 - ProteinModelPortal: Q1GEZ2 - SMR: Q1GEZ2 - STRING: Q1GEZ2 - GeneID: 4077969 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_2042 - NMPDR: fig|292414.1.peg.414 - eggNOG: COG0140 - HOGENOM: HBG646527 - OMA: ETVMAAK - ProtClustDB: PRK00400 - BioCyc: SSP292414:TM1040_2042-MONOMER - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 11335; Mature: 11204
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLHDLEQTILSRKGTDPDTSWTAKLLSKGPEKCAEKFGEEAIEAIIEAVKDDKAKLAS CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGADVLYHFLVMLAARDVALDDVLTVLAERQGLSGLAEKAARPKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC >Mature Secondary Structure TLLHDLEQTILSRKGTDPDTSWTAKLLSKGPEKCAEKFGEEAIEAIIEAVKDDKAKLAS CHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGADVLYHFLVMLAARDVALDDVLTVLAERQGLSGLAEKAARPKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA