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The map label for this gene is ycgF [C]

Identifier: 99081865

GI number: 99081865

Start: 2131376

End: 2131885

Strand: Direct

Name: ycgF [C]

Synonym: TM1040_2025

Alternate gene names: 99081865

Gene position: 2131376-2131885 (Clockwise)

Preceding gene: 99081863

Following gene: 99081866

Centisome position: 66.59

GC content: 61.18

Gene sequence:

>510_bases
ATGAACAGGCCGCTCGCCTTCAACAGGATCGCGCGCAGGCGCCGTTTGTGCTACGCCGGGCACAAGCGCCAATGGCGCGG
AAAGGCCATGAAGATGAGACGTATCATATACACCAGCGACGCAAGCCCCCTGATGACGGACGAGAAAGTCGCCGCCATCG
CGGAGAAATCCCGGCGCAAGAACGGAAGCATGGGGCTCACCGGGGCGTTGTCTTTTGACAAGGGGCGTTTCTTGCAACTG
CTGGAGGGCCCGTCCGAGGCGGTGACCGCCCGGTTCGAGGCGATCCGGCGTGACGCGCGCCATCAGAACATCCAGATCAT
CTGCGACGTGCCGACCAATATGCGCAATTTCCCCAACAAACCAATGGCATTGATGCTGCCGGGCGAGGTGAGTGAAGACA
TGCATGAAGCCCTGTCGGCGCTTTTTGATCTGGCGGATGAACCTGTCGCCCCTTCGCGCCAGACCCTTGGCGATCTGTTG
CCGCGGTTTTCGGAACTGGACGCCGCCTGA

Upstream 100 bases:

>100_bases
TGCGCGGATGTTGTGACACCGCCATAGCAGTGCCTTCTGCGACAATAAAGCGGGTCTGCGTGCCTGCCTCCTGTACCAAA
GGCTAGGTCGGACACACGAA

Downstream 100 bases:

>100_bases
GCCCGCTTGCGTTTTGCACGCCAGCAGCCGCCCCTCAGAAAGATCGCTCCTGAGATCTGAGGCCCCCGACCCAATCCCCA
TAGAGAGCCAAACCGCCGAG

Product: BLUF domain-containing protein

Products: NA

Alternate protein names: Bluf Domain Protein; Photopigment And Puc Activator; Photopigment And Puc Expression Activator

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNRPLAFNRIARRRRLCYAGHKRQWRGKAMKMRRIIYTSDASPLMTDEKVAAIAEKSRRKNGSMGLTGALSFDKGRFLQL
LEGPSEAVTARFEAIRRDARHQNIQIICDVPTNMRNFPNKPMALMLPGEVSEDMHEALSALFDLADEPVAPSRQTLGDLL
PRFSELDAA

Sequences:

>Translated_169_residues
MNRPLAFNRIARRRRLCYAGHKRQWRGKAMKMRRIIYTSDASPLMTDEKVAAIAEKSRRKNGSMGLTGALSFDKGRFLQL
LEGPSEAVTARFEAIRRDARHQNIQIICDVPTNMRNFPNKPMALMLPGEVSEDMHEALSALFDLADEPVAPSRQTLGDLL
PRFSELDAA
>Mature_169_residues
MNRPLAFNRIARRRRLCYAGHKRQWRGKAMKMRRIIYTSDASPLMTDEKVAAIAEKSRRKNGSMGLTGALSFDKGRFLQL
LEGPSEAVTARFEAIRRDARHQNIQIICDVPTNMRNFPNKPMALMLPGEVSEDMHEALSALFDLADEPVAPSRQTLGDLL
PRFSELDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19098; Mature: 19098

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPLAFNRIARRRRLCYAGHKRQWRGKAMKMRRIIYTSDASPLMTDEKVAAIAEKSRRK
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHC
NGSMGLTGALSFDKGRFLQLLEGPSEAVTARFEAIRRDARHQNIQIICDVPTNMRNFPNK
CCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PMALMLPGEVSEDMHEALSALFDLADEPVAPSRQTLGDLLPRFSELDAA
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRPLAFNRIARRRRLCYAGHKRQWRGKAMKMRRIIYTSDASPLMTDEKVAAIAEKSRRK
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHC
NGSMGLTGALSFDKGRFLQLLEGPSEAVTARFEAIRRDARHQNIQIICDVPTNMRNFPNK
CCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PMALMLPGEVSEDMHEALSALFDLADEPVAPSRQTLGDLLPRFSELDAA
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA