| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081851
Identifier: 99081851
GI number: 99081851
Start: 2116316
End: 2116756
Strand: Direct
Name: 99081851
Synonym: TM1040_2011
Alternate gene names: NA
Gene position: 2116316-2116756 (Clockwise)
Preceding gene: 99081849
Following gene: 99081852
Centisome position: 66.12
GC content: 62.13
Gene sequence:
>441_bases ATGGGCTACCGGGTTGCAGCGCGCGTCTTATCAGCGGCGGAAGTCGGCGGGACGCATACCCGTGAAGGCTGTTCATTCTG GCCCACGCCGACGTTCAAGAGCTCAGGCAATCGCGCTTGCATCGCTGGGGGCCCGGAGGGGATCCAGTTCAAGACCGATC AGAACCAGACCGGCTCACAGATCGGGATCAAGACCGCCGCAACCGCCTGGACGCTCATGTGGGACTTGATGATGGCGGCG GGTTGGACCCCTCAGCGGTTCCGGTCTTCCCACCGCTTCCGGGTGATTTTGCTGAATGGGGAGAAATACTCGGATCATCC CCTAACCTTAAACCCTGCCTTCACGGACTGGATGATGGGGTGGCCTTCGGGCTGGACCGATCCGCTGCAGCCGGTAACGG GGTGGTGCCAATGGCTGCGGCACGCGCGTACCTTGATCTGA
Upstream 100 bases:
>100_bases CGGGGTTGCGGTTGACCACTAGCAGAAGAACCGCTGGCGAGACCATCGCCCGCGATCCGGCGACACTGACCTCCAAGACG TCACCCGAGATCTTCAGGCA
Downstream 100 bases:
>100_bases AAAAGGCCCTCGCTTGAAGCAACCCTTTGAAGGGGCTTAAACGCCCCTTCAATCCCGCCTCAACCCAAAAACTGGTTGCT GTAAAAAAGTCTGTAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQIGIKTAATAWTLMWDLMMAA GWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMGWPSGWTDPLQPVTGWCQWLRHARTLI
Sequences:
>Translated_146_residues MGYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQIGIKTAATAWTLMWDLMMAA GWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMGWPSGWTDPLQPVTGWCQWLRHARTLI >Mature_145_residues GYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQIGIKTAATAWTLMWDLMMAAG WTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMGWPSGWTDPLQPVTGWCQWLRHARTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16329; Mature: 16198
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQ CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC IGIKTAATAWTLMWDLMMAAGWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMG CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCHHHHHCC WPSGWTDPLQPVTGWCQWLRHARTLI CCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GYRVAARVLSAAEVGGTHTREGCSFWPTPTFKSSGNRACIAGGPEGIQFKTDQNQTGSQ CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC IGIKTAATAWTLMWDLMMAAGWTPQRFRSSHRFRVILLNGEKYSDHPLTLNPAFTDWMMG CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCHHHHHCC WPSGWTDPLQPVTGWCQWLRHARTLI CCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA