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The map label for this gene is 99081848

Identifier: 99081848

GI number: 99081848

Start: 2113464

End: 2113961

Strand: Reverse

Name: 99081848

Synonym: TM1040_2008

Alternate gene names: NA

Gene position: 2113961-2113464 (Counterclockwise)

Preceding gene: 99081850

Following gene: 99081845

Centisome position: 66.04

GC content: 63.86

Gene sequence:

>498_bases
ATGTCAAACTCAGATGTGCCTCCTCCCGCCAGCCAGACACCCGTGGTCGACCCTTCTGTGCGTGCGCGCGCACCCGTTCG
GATGGACCGCTGTGGTCTCGCGCAGGCCGCGGACATCCTGGGCGATCGCTGGACGCTGTTGATCCTGCGCGAGGCGTTTT
ATGGCGTGGTGCGCTTTGCCGATATGCAGGAAGACATCGGAGTGCCGCGCTCGATCCTGTCAAACCGTCTTGCCAAGCTG
GTCGAGGCTGGTTTGCTCTGCCGGTTCGAGTATCGCGAGAACGGGGCGCGGGCGCGGCATGGCTACCGGCTGACGGAGCG
CGGTCGCGATCTCGCGCTGACGTTCCTGGCGATGAAACAATGGTGGGATACAGAGCAAAGCACCACGCCGTCGGTGCATT
TTGCGCCAAAGGGCAAGACCGGTGCAGTGCGCGTCGCGCTGCTTGATGAGGACGGTCAGGAGGTCGATCCCGAAACCCTG
CGGGTGGTGATGGGCTGA

Upstream 100 bases:

>100_bases
GGGCGCGCGGCGGGCGTGGCGGGGATGAAGCGGGTGGTCATATGGGGCTCCTCGGTCTAAATTATGTACTCAGATTGTCG
CGTAGAGAGCCTAAGTCCAT

Downstream 100 bases:

>100_bases
TAGCACTGAGCGAATATTCGGCAGTTTGGACAGGGCGCGCGGGGTCGGGGGCCCAGTGTGCGCTGCGCGCGGCATTCGTT
AAAACGCCTGCCCGGCAGAA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSNSDVPPPASQTPVVDPSVRARAPVRMDRCGLAQAADILGDRWTLLILREAFYGVVRFADMQEDIGVPRSILSNRLAKL
VEAGLLCRFEYRENGARARHGYRLTERGRDLALTFLAMKQWWDTEQSTTPSVHFAPKGKTGAVRVALLDEDGQEVDPETL
RVVMG

Sequences:

>Translated_165_residues
MSNSDVPPPASQTPVVDPSVRARAPVRMDRCGLAQAADILGDRWTLLILREAFYGVVRFADMQEDIGVPRSILSNRLAKL
VEAGLLCRFEYRENGARARHGYRLTERGRDLALTFLAMKQWWDTEQSTTPSVHFAPKGKTGAVRVALLDEDGQEVDPETL
RVVMG
>Mature_164_residues
SNSDVPPPASQTPVVDPSVRARAPVRMDRCGLAQAADILGDRWTLLILREAFYGVVRFADMQEDIGVPRSILSNRLAKLV
EAGLLCRFEYRENGARARHGYRLTERGRDLALTFLAMKQWWDTEQSTTPSVHFAPKGKTGAVRVALLDEDGQEVDPETLR
VVMG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 18380; Mature: 18249

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS51118 HTH_HXLR ; PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSDVPPPASQTPVVDPSVRARAPVRMDRCGLAQAADILGDRWTLLILREAFYGVVRFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DMQEDIGVPRSILSNRLAKLVEAGLLCRFEYRENGARARHGYRLTERGRDLALTFLAMKQ
HHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHH
WWDTEQSTTPSVHFAPKGKTGAVRVALLDEDGQEVDPETLRVVMG
HHCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHEEEECC
>Mature Secondary Structure 
SNSDVPPPASQTPVVDPSVRARAPVRMDRCGLAQAADILGDRWTLLILREAFYGVVRFA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DMQEDIGVPRSILSNRLAKLVEAGLLCRFEYRENGARARHGYRLTERGRDLALTFLAMKQ
HHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHH
WWDTEQSTTPSVHFAPKGKTGAVRVALLDEDGQEVDPETLRVVMG
HHCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]