Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081836

Identifier: 99081836

GI number: 99081836

Start: 2100825

End: 2101094

Strand: Reverse

Name: 99081836

Synonym: TM1040_1996

Alternate gene names: NA

Gene position: 2101094-2100825 (Counterclockwise)

Preceding gene: 99081840

Following gene: 99081835

Centisome position: 65.64

GC content: 56.3

Gene sequence:

>270_bases
GTGACCAAGGCCCATAAAACGGCGTCATTGCTTTGCTGCGGAGCAGAGCGTGTTTTGCGCTGGTTTAGCGACAATTGGCG
GAGCGGGCAGCACGCGGGGCCCGCCCGGCGACTGCGTGAAGGGCAGTGTCCCTTAAGAGCGGAGCAGGCGATGACCCGCG
GATTTGGTATGAATATTCTGCAAAGTGAAATTTGTGCTGTTCCTCTGTGGGGGTGGTATTCGCTTCCGTTGCGTCACGTT
TTGGTTCGTTTTGCATGGGAATCCTACTGA

Upstream 100 bases:

>100_bases
GTGCCATGATCGCTACCTCTTACCCGCAGATCCGCCAGAACTCTCGAGATCTGTGATTATACACGCTGTTATAGTTTGCG
GACACACTCCTTAACTTTTG

Downstream 100 bases:

>100_bases
TTCTGTCCTTTATGGTCATGTATATAAAGCCATTATTGAAATTTTCACGCCTTGGTTGAGCGCAGTTGACGGGTGCCAGA
TGGTTGTGTTCTCGATAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNILQSEICAVPLWGWYSLPLRHV
LVRFAWESY

Sequences:

>Translated_89_residues
MTKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNILQSEICAVPLWGWYSLPLRHV
LVRFAWESY
>Mature_88_residues
TKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNILQSEICAVPLWGWYSLPLRHVL
VRFAWESY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10262; Mature: 10131

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNIL
CCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHH
QSEICAVPLWGWYSLPLRHVLVRFAWESY
HHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKAHKTASLLCCGAERVLRWFSDNWRSGQHAGPARRLREGQCPLRAEQAMTRGFGMNIL
CCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCHHH
QSEICAVPLWGWYSLPLRHVLVRFAWESY
HHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA