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The map label for this gene is 99081835

Identifier: 99081835

GI number: 99081835

Start: 2099764

End: 2100681

Strand: Reverse

Name: 99081835

Synonym: TM1040_1995

Alternate gene names: NA

Gene position: 2100681-2099764 (Counterclockwise)

Preceding gene: 99081836

Following gene: 99081833

Centisome position: 65.63

GC content: 59.04

Gene sequence:

>918_bases
ATGAACGCAGGGGACATTGCATCCACAGAGCAAAGCCGCGCGGCAGAGCTCGAGGCGGCGGGCGGACTTCGGGTGCCGCA
GTTGTTTAGCGACCTGCCAGAGGCCGTGATCGTGGCGGATCATGCGCGCAGGATCTCTTGGGTCAACCCGGCCTTTGAGC
GACTGTTCGGCTATGCGCTCAGCGATGTACGCGGGCGAACCACCGAGTTCCTTTATGCCTCACATGAGAGCTATCTTGAA
AAAGGCAGGGCGCATTTCAGCGCTGTGCCTTCGGCATCGGACCACAGCTATGAAGTGACCTATCGCAGGCGCAATACCGA
GACCTTCCTGAGCCAGACCACCGGTGGCCCGATCCGGGGCGCAGATGGGGCGCCTGTTGGCTATCTTGCTGTGATCAAAG
ACATTTCCCAAACGCGCCTGTTTGAGACCTTGCTCAGGGTGTTGTTTGACATCACCACCAACCAGGCGCTGTCGCGCGAT
GAAAAGGTTCATGAAATCCTCAAGCTGGGATGCGAGCGGTTTCAGACCATGTCCGCGATTATCAGCTGTGTGCAAGGGCA
GACTTATACGGTGTCGTATTGCTATTCGCATGAGGCGCCGGTCGAACCGGGTACCCGATTTGAGCTCGGCGAGACCTATT
GCGCGCAGACGCTCACGGGCGAGGGGCCGGTTGCCTATCATCGCGCTTCGCAGTCCGGGATCGCCTCGCACCCGTGCTAT
GACATGTTCCTACTTGAAACCTATATCGGGGTGCCGTTGATCGTGGATGGCCATGTCTTTGGCACGCTCAACTTCACGTC
ACCAGAGGCGCGCGCGCCCTTTGAGCCGATGGACCTGGAGCTAATCAAGCTGTTTGCGGCCTGGGTGTCGCAGCAGTTGA
GCATCGATGCGGCGCTCTCGGCTGCAAAGCTGAGATAG

Upstream 100 bases:

>100_bases
TTCACGCCTTGGTTGAGCGCAGTTGACGGGTGCCAGATGGTTGTGTTCTCGATAAGGGGTGACACTATTGAATGTGAATT
TGTGAAAGTTAGGGGGTGAA

Downstream 100 bases:

>100_bases
AAAGCGTGCAAGGGCTCGGACGTGCCGGGTCGGATGGCCAGGGCTGCCCCGGGAGAGGCGCGCCCGATCAGATCGCGTTT
TGGACGTTCTGTGCCGTGTT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; PAS Fold Family; Intracellular Signaling Protein; PAS/PAC Sensor Protein; HTR-Like Protein; Signal-Transducing Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; GAF Sensor Signal Transduction Histidine Kinase; Light And Oxygen Sensing Histidine Kinase; 11-Domain Light And Oxygen Sensing His Kinase; GAF/PAS/GGDEF Domain-Containing Protein; Two-Component Hybrid Sensor And Regulator; GAF Sensor Hybrid Histidine Kinase; Light- And Oxygen-Sensing Histidine Kinase; Diguanylate Cyclase With Pas/Pac Sensor; GGDEF/PAS/PAC-Domain-Containing Protein; Signal-Transducing Histidine Kinase / Response Regulator; Diguanylate Cyclase; Nineteen Domain Light And Oxygen Sensing His Kinase; Pas Domain S-Box; Ggdef/Pas/Pac-Domain Containing Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Signal Transduction Protein; Adaptive-Response Sensory-Kinase; Sensory Transduction Histidine Kinase; PAS Domain S-Box; Light And Redox Sensing Histidine Kinase; Diguanylate Cyclase With PAS/PAC And GAF Sensors

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNAGDIASTEQSRAAELEAAGGLRVPQLFSDLPEAVIVADHARRISWVNPAFERLFGYALSDVRGRTTEFLYASHESYLE
KGRAHFSAVPSASDHSYEVTYRRRNTETFLSQTTGGPIRGADGAPVGYLAVIKDISQTRLFETLLRVLFDITTNQALSRD
EKVHEILKLGCERFQTMSAIISCVQGQTYTVSYCYSHEAPVEPGTRFELGETYCAQTLTGEGPVAYHRASQSGIASHPCY
DMFLLETYIGVPLIVDGHVFGTLNFTSPEARAPFEPMDLELIKLFAAWVSQQLSIDAALSAAKLR

Sequences:

>Translated_305_residues
MNAGDIASTEQSRAAELEAAGGLRVPQLFSDLPEAVIVADHARRISWVNPAFERLFGYALSDVRGRTTEFLYASHESYLE
KGRAHFSAVPSASDHSYEVTYRRRNTETFLSQTTGGPIRGADGAPVGYLAVIKDISQTRLFETLLRVLFDITTNQALSRD
EKVHEILKLGCERFQTMSAIISCVQGQTYTVSYCYSHEAPVEPGTRFELGETYCAQTLTGEGPVAYHRASQSGIASHPCY
DMFLLETYIGVPLIVDGHVFGTLNFTSPEARAPFEPMDLELIKLFAAWVSQQLSIDAALSAAKLR
>Mature_305_residues
MNAGDIASTEQSRAAELEAAGGLRVPQLFSDLPEAVIVADHARRISWVNPAFERLFGYALSDVRGRTTEFLYASHESYLE
KGRAHFSAVPSASDHSYEVTYRRRNTETFLSQTTGGPIRGADGAPVGYLAVIKDISQTRLFETLLRVLFDITTNQALSRD
EKVHEILKLGCERFQTMSAIISCVQGQTYTVSYCYSHEAPVEPGTRFELGETYCAQTLTGEGPVAYHRASQSGIASHPCY
DMFLLETYIGVPLIVDGHVFGTLNFTSPEARAPFEPMDLELIKLFAAWVSQQLSIDAALSAAKLR

Specific function: Unknown

COG id: COG2203

COG function: function code T; FOG: GAF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33628; Mature: 33628

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGDIASTEQSRAAELEAAGGLRVPQLFSDLPEAVIVADHARRISWVNPAFERLFGYAL
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHEEEHHHHHHHHHCCHHHHHHHHHHH
SDVRGRTTEFLYASHESYLEKGRAHFSAVPSASDHSYEVTYRRRNTETFLSQTTGGPIRG
HHHCCCCHHHEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCC
ADGAPVGYLAVIKDISQTRLFETLLRVLFDITTNQALSRDEKVHEILKLGCERFQTMSAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISCVQGQTYTVSYCYSHEAPVEPGTRFELGETYCAQTLTGEGPVAYHRASQSGIASHPCY
HHHHCCCEEEEEEEECCCCCCCCCCCEECCHHHHHHHCCCCCCEEEECCCCCCCCCCCHH
DMFLLETYIGVPLIVDGHVFGTLNFTSPEARAPFEPMDLELIKLFAAWVSQQLSIDAALS
HHHHHHHHCCCCEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAKLR
HHHCC
>Mature Secondary Structure
MNAGDIASTEQSRAAELEAAGGLRVPQLFSDLPEAVIVADHARRISWVNPAFERLFGYAL
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHEEEHHHHHHHHHCCHHHHHHHHHHH
SDVRGRTTEFLYASHESYLEKGRAHFSAVPSASDHSYEVTYRRRNTETFLSQTTGGPIRG
HHHCCCCHHHEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCC
ADGAPVGYLAVIKDISQTRLFETLLRVLFDITTNQALSRDEKVHEILKLGCERFQTMSAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISCVQGQTYTVSYCYSHEAPVEPGTRFELGETYCAQTLTGEGPVAYHRASQSGIASHPCY
HHHHCCCEEEEEEEECCCCCCCCCCCEECCHHHHHHHCCCCCCEEEECCCCCCCCCCCHH
DMFLLETYIGVPLIVDGHVFGTLNFTSPEARAPFEPMDLELIKLFAAWVSQQLSIDAALS
HHHHHHHHCCCCEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAKLR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA