The gene/protein map for NC_008086 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is dicA [C]

Identifier: 99081750

GI number: 99081750

Start: 2011866

End: 2012237

Strand: Reverse

Name: dicA [C]

Synonym: TM1040_1909

Alternate gene names: 99081750

Gene position: 2012237-2011866 (Counterclockwise)

Preceding gene: 99081752

Following gene: 99081749

Centisome position: 62.86

GC content: 55.38

Gene sequence:

>372_bases
ATGGCACATCCCGTCGACATTCACGTTGGCAAACGCATCCGGCACCGTCGCTGGCTGATCGGCATGACGCAGCAACAATT
GGCTGAGAAAGTCGGAATTAAGTTTCAGCAGATCCAGAAATATGAAACCGGTGCCAACCGTGTGAGCGCGTCGCGCCTTT
GGGATATTTCCGACGCACTCGATGTGAATATCAGCTTCTTTTTTGAGGGCCTGCAGGACGAGACCAAATCGGTCCCTGAC
AAAGCCCGTGTCCCAGCCGATCTGATGGGCGATAAAGAAGCGCTGGATCTCGTGCGGTCCTACTATGCGATCCCGGAAAA
TCAGCGTCGCCGTCTCTTTGAACTCGCTCGGGTGCTGAGCGACGTCGCCTGA

Upstream 100 bases:

>100_bases
ATGTCACGCCATCGGATTGCGGGTCCGGGACAAGGGTTTTCGACGCCTTTGGGCGCGTCATCCACCCGATTTCGGAGGCC
GTAGCTGGGAGATACTACAT

Downstream 100 bases:

>100_bases
GCACGGGCTGGCCCAAGTCCGGGTGACCGCGATCTGCGCGGTGTTTCCTGCTTACTATACAGAGGTCGCCTTTGGGCGGC
CTTTTGCTTTGCGTAACTGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAHPVDIHVGKRIRHRRWLIGMTQQQLAEKVGIKFQQIQKYETGANRVSASRLWDISDALDVNISFFFEGLQDETKSVPD
KARVPADLMGDKEALDLVRSYYAIPENQRRRLFELARVLSDVA

Sequences:

>Translated_123_residues
MAHPVDIHVGKRIRHRRWLIGMTQQQLAEKVGIKFQQIQKYETGANRVSASRLWDISDALDVNISFFFEGLQDETKSVPD
KARVPADLMGDKEALDLVRSYYAIPENQRRRLFELARVLSDVA
>Mature_122_residues
AHPVDIHVGKRIRHRRWLIGMTQQQLAEKVGIKFQQIQKYETGANRVSASRLWDISDALDVNISFFFEGLQDETKSVPDK
ARVPADLMGDKEALDLVRSYYAIPENQRRRLFELARVLSDVA

Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14181; Mature: 14050

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPVDIHVGKRIRHRRWLIGMTQQQLAEKVGIKFQQIQKYETGANRVSASRLWDISDAL
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHH
DVNISFFFEGLQDETKSVPDKARVPADLMGDKEALDLVRSYYAIPENQRRRLFELARVLS
HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DVA
HCC
>Mature Secondary Structure 
AHPVDIHVGKRIRHRRWLIGMTQQQLAEKVGIKFQQIQKYETGANRVSASRLWDISDAL
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHH
DVNISFFFEGLQDETKSVPDKARVPADLMGDKEALDLVRSYYAIPENQRRRLFELARVLS
HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DVA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]