Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081749

Identifier: 99081749

GI number: 99081749

Start: 2011553

End: 2011843

Strand: Reverse

Name: 99081749

Synonym: TM1040_1908

Alternate gene names: NA

Gene position: 2011843-2011553 (Counterclockwise)

Preceding gene: 99081750

Following gene: 99081748

Centisome position: 62.85

GC content: 62.2

Gene sequence:

>291_bases
GTGACCGCGATCTGCGCGGTGTTTCCTGCTTACTATACAGAGGTCGCCTTTGGGCGGCCTTTTGCTTTGCGTAACTGCGC
CTCACACGGCCCTCTGCGGAGCAGGCGGAAGGGCTTTCACGCGAAGAGCGCCCGACCACAGATCCCGGACCAATTGGCAG
GGGCGCAGGCCGCGCAACCAAGCCCGGTGGGCAGATTTGGCTTGAAAGCGACTGCGTGGCGTGGCACCCGATCCGGGCCT
GCCACCTCAATCATCGGGGCTTTTTATGACACATCCTTCGACGCTGTCTGA

Upstream 100 bases:

>100_bases
CGGTCCTACTATGCGATCCCGGAAAATCAGCGTCGCCGTCTCTTTGAACTCGCTCGGGTGCTGAGCGACGTCGCCTGAGC
ACGGGCTGGCCCAAGTCCGG

Downstream 100 bases:

>100_bases
TCTGGACGTTGCCCGCCGCCTTGCCGAGGCTGCCCGTGCAGCAATCCTTCCGCATTTTCGCAACAGCGCCACGGCAGCAG
ACAACAAGCTGGAGGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQPSPVGRFGLKATAWRGTRSGP
ATSIIGAFYDTSFDAV

Sequences:

>Translated_96_residues
MTAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQPSPVGRFGLKATAWRGTRSGP
ATSIIGAFYDTSFDAV
>Mature_95_residues
TAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQPSPVGRFGLKATAWRGTRSGPA
TSIIGAFYDTSFDAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10244; Mature: 10113

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQP
CCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCC
SPVGRFGLKATAWRGTRSGPATSIIGAFYDTSFDAV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQP
CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCC
SPVGRFGLKATAWRGTRSGPATSIIGAFYDTSFDAV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA