| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081749
Identifier: 99081749
GI number: 99081749
Start: 2011553
End: 2011843
Strand: Reverse
Name: 99081749
Synonym: TM1040_1908
Alternate gene names: NA
Gene position: 2011843-2011553 (Counterclockwise)
Preceding gene: 99081750
Following gene: 99081748
Centisome position: 62.85
GC content: 62.2
Gene sequence:
>291_bases GTGACCGCGATCTGCGCGGTGTTTCCTGCTTACTATACAGAGGTCGCCTTTGGGCGGCCTTTTGCTTTGCGTAACTGCGC CTCACACGGCCCTCTGCGGAGCAGGCGGAAGGGCTTTCACGCGAAGAGCGCCCGACCACAGATCCCGGACCAATTGGCAG GGGCGCAGGCCGCGCAACCAAGCCCGGTGGGCAGATTTGGCTTGAAAGCGACTGCGTGGCGTGGCACCCGATCCGGGCCT GCCACCTCAATCATCGGGGCTTTTTATGACACATCCTTCGACGCTGTCTGA
Upstream 100 bases:
>100_bases CGGTCCTACTATGCGATCCCGGAAAATCAGCGTCGCCGTCTCTTTGAACTCGCTCGGGTGCTGAGCGACGTCGCCTGAGC ACGGGCTGGCCCAAGTCCGG
Downstream 100 bases:
>100_bases TCTGGACGTTGCCCGCCGCCTTGCCGAGGCTGCCCGTGCAGCAATCCTTCCGCATTTTCGCAACAGCGCCACGGCAGCAG ACAACAAGCTGGAGGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQPSPVGRFGLKATAWRGTRSGP ATSIIGAFYDTSFDAV
Sequences:
>Translated_96_residues MTAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQPSPVGRFGLKATAWRGTRSGP ATSIIGAFYDTSFDAV >Mature_95_residues TAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQPSPVGRFGLKATAWRGTRSGPA TSIIGAFYDTSFDAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10244; Mature: 10113
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQP CCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCC SPVGRFGLKATAWRGTRSGPATSIIGAFYDTSFDAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TAICAVFPAYYTEVAFGRPFALRNCASHGPLRSRRKGFHAKSARPQIPDQLAGAQAAQP CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCC SPVGRFGLKATAWRGTRSGPATSIIGAFYDTSFDAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA