Click here to switch to the map view.

The map label for this gene is ygfA [C]

Identifier: 99081744

GI number: 99081744

Start: 2005708

End: 2006295

Strand: Reverse

Name: ygfA [C]

Synonym: TM1040_1903

Alternate gene names: 99081744

Gene position: 2006295-2005708 (Counterclockwise)

Preceding gene: 99081745

Following gene: 99081742

Centisome position: 62.68

GC content: 65.99

Gene sequence:

>588_bases
ATGAGTGACACGGATCGGGACGCAGGCGATTTGACCGCCATCAAGGCAGCGGCGCGCAAGGCCGCCTTCGTGCGGCGCAA
AGGCGCCTTTGAGACGCAGCGCCCCGGAGCGGCGGGCCATCTGGCCGAGGTGCTCGCAGGATATCGCGGCGTGCCTCTTG
CGGGATATATGCCCATTCGCACCGAGATTGACCCGCTGGGTGTGATGGCCGAAGCCGCCGCCCACGGACCCGTGGGGGTG
CCGGTGATCCAGGGCGCAGGCCTGCCGCTCAAATTCAGCCGCTGGCAGCCCGAAGGCGCGCTGCGCGACGGTCCTTTTGG
CGCTAAGGTTCCGGAAGTAGACGATTACTTCGATCCCGAAATCCTCATTGTGCCGCTGGTGGCCTTTGATGCGGCGGGCA
ATCGCCTGGGCTATGGCGGCGGGTTTTATGACCGGACGCTGGACCGGCTTCGGGCGCAGCGTGCGACGCTGGCGATCGGG
TTCGCCTTTGACGCCCAAGAAGCCGAAGGCCTGCCGCTCGAGCCTACCGATCAGCCGCTCGACATGATCGTGACCGAGAG
CCGGGTGCTGGATTTCAAACGCCCCTGA

Upstream 100 bases:

>100_bases
GGGGCATTTGTGACCACGGTGACGGATGTTGTGGGATTTTTTGCCTTCCTGGGCCTTGCGGGGGCGGTCTTGATCTAACG
CGACGCAGGGACATCAGCGC

Downstream 100 bases:

>100_bases
TGCGACTGACGCGACTGACGCCTCTGGCACAGGCGCTTTTCCCGCTGTGGGGACGTTTTTCTCAGGCCCCCATTGCGCGC
CGATCTTGAGCATGCCGGAT

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSDTDRDAGDLTAIKAAARKAAFVRRKGAFETQRPGAAGHLAEVLAGYRGVPLAGYMPIRTEIDPLGVMAEAAAHGPVGV
PVIQGAGLPLKFSRWQPEGALRDGPFGAKVPEVDDYFDPEILIVPLVAFDAAGNRLGYGGGFYDRTLDRLRAQRATLAIG
FAFDAQEAEGLPLEPTDQPLDMIVTESRVLDFKRP

Sequences:

>Translated_195_residues
MSDTDRDAGDLTAIKAAARKAAFVRRKGAFETQRPGAAGHLAEVLAGYRGVPLAGYMPIRTEIDPLGVMAEAAAHGPVGV
PVIQGAGLPLKFSRWQPEGALRDGPFGAKVPEVDDYFDPEILIVPLVAFDAAGNRLGYGGGFYDRTLDRLRAQRATLAIG
FAFDAQEAEGLPLEPTDQPLDMIVTESRVLDFKRP
>Mature_194_residues
SDTDRDAGDLTAIKAAARKAAFVRRKGAFETQRPGAAGHLAEVLAGYRGVPLAGYMPIRTEIDPLGVMAEAAAHGPVGVP
VIQGAGLPLKFSRWQPEGALRDGPFGAKVPEVDDYFDPEILIVPLVAFDAAGNRLGYGGGFYDRTLDRLRAQRATLAIGF
AFDAQEAEGLPLEPTDQPLDMIVTESRVLDFKRP

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=73, Percent_Identity=50.6849315068493, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 20875; Mature: 20744

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTDRDAGDLTAIKAAARKAAFVRRKGAFETQRPGAAGHLAEVLAGYRGVPLAGYMPIR
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
TEIDPLGVMAEAAAHGPVGVPVIQGAGLPLKFSRWQPEGALRDGPFGAKVPEVDDYFDPE
CCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
ILIVPLVAFDAAGNRLGYGGGFYDRTLDRLRAQRATLAIGFAFDAQEAEGLPLEPTDQPL
EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCH
DMIVTESRVLDFKRP
HEEEEHHHHCCCCCC
>Mature Secondary Structure 
SDTDRDAGDLTAIKAAARKAAFVRRKGAFETQRPGAAGHLAEVLAGYRGVPLAGYMPIR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
TEIDPLGVMAEAAAHGPVGVPVIQGAGLPLKFSRWQPEGALRDGPFGAKVPEVDDYFDPE
CCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
ILIVPLVAFDAAGNRLGYGGGFYDRTLDRLRAQRATLAIGFAFDAQEAEGLPLEPTDQPL
EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCH
DMIVTESRVLDFKRP
HEEEEHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]