Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081699

Identifier: 99081699

GI number: 99081699

Start: 1960107

End: 1960547

Strand: Reverse

Name: 99081699

Synonym: TM1040_1858

Alternate gene names: NA

Gene position: 1960547-1960107 (Counterclockwise)

Preceding gene: 99081700

Following gene: 99081694

Centisome position: 61.25

GC content: 65.31

Gene sequence:

>441_bases
ATGACGCTCGTGCGGGCGCGCTATACTTGGCTCATGATACAGCATCGACATATCACCTCTCGCCTGGGCCTTGCGCTTGG
GGTCTGTCTCGCGCTTGCGGGTCCGCCGCTCTCGGCGCAGGAGGCGCCGACAGAGAACAACGGGGCTGACGGCCCCAGTT
TGATGGAGCGCGGGATGGAGCTGTTCTTTGAGGGGCTGCGGCGCGAGATGGAGCCGACCCTCGAAGAGGCCGCGCGCCTC
CTTTCGGAGGTCGGCCCCTCGATGCGCAGCTTTCTGGCCGAAATGGGCCCCGCGCTGGCGGAGATTGCGGATCAGGTGGA
GGATTGGAGCGTCTACGAGATGCCCGAAATCCTGCCCAATGGCGACATCATCATCCGCCGCAAGGACCCCAAACCCGAGC
CCGCGCCAGCCCCTCAGCCCGACGACAGTATCGAGCTCTGA

Upstream 100 bases:

>100_bases
ATCACTTTCCGGTCACGCTGGATCTGGACCTCACGCAGGCCAGCCGCCCCGAGGATGGCGGGGATTTGCAGATCTGACGC
AGGTCTGGAAACTCTCACCT

Downstream 100 bases:

>100_bases
ACAGCGCTCTGTTGCGTGAAACTCCGTTGCGTGAAACTCAGGAGCGTGCGGGGTGCAAAGGGCGCGCTCAGTCGCGCGCG
TCTTTTTCCAGCAGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTLVRARYTWLMIQHRHITSRLGLALGVCLALAGPPLSAQEAPTENNGADGPSLMERGMELFFEGLRREMEPTLEEAARL
LSEVGPSMRSFLAEMGPALAEIADQVEDWSVYEMPEILPNGDIIIRRKDPKPEPAPAPQPDDSIEL

Sequences:

>Translated_146_residues
MTLVRARYTWLMIQHRHITSRLGLALGVCLALAGPPLSAQEAPTENNGADGPSLMERGMELFFEGLRREMEPTLEEAARL
LSEVGPSMRSFLAEMGPALAEIADQVEDWSVYEMPEILPNGDIIIRRKDPKPEPAPAPQPDDSIEL
>Mature_145_residues
TLVRARYTWLMIQHRHITSRLGLALGVCLALAGPPLSAQEAPTENNGADGPSLMERGMELFFEGLRREMEPTLEEAARLL
SEVGPSMRSFLAEMGPALAEIADQVEDWSVYEMPEILPNGDIIIRRKDPKPEPAPAPQPDDSIEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16149; Mature: 16018

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVRARYTWLMIQHRHITSRLGLALGVCLALAGPPLSAQEAPTENNGADGPSLMERGME
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LFFEGLRREMEPTLEEAARLLSEVGPSMRSFLAEMGPALAEIADQVEDWSVYEMPEILPN
HHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCCC
GDIIIRRKDPKPEPAPAPQPDDSIEL
CCEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLVRARYTWLMIQHRHITSRLGLALGVCLALAGPPLSAQEAPTENNGADGPSLMERGME
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LFFEGLRREMEPTLEEAARLLSEVGPSMRSFLAEMGPALAEIADQVEDWSVYEMPEILPN
HHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCCC
GDIIIRRKDPKPEPAPAPQPDDSIEL
CCEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA