| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081690
Identifier: 99081690
GI number: 99081690
Start: 1949215
End: 1950009
Strand: Reverse
Name: 99081690
Synonym: TM1040_1849
Alternate gene names: NA
Gene position: 1950009-1949215 (Counterclockwise)
Preceding gene: 99081691
Following gene: 99081689
Centisome position: 60.92
GC content: 59.37
Gene sequence:
>795_bases ATGGACAGGTCCCCATACTATGGCACCGACAAGATCATGGCGCTGCAACGCGCACGTGACGCGCAGGTCGCTGACTTTGC CGATCTTGCGGGTGCCGTGATCCATGCGCGCACCTTCTCGAGCGATGACCCGGCTGCGCTGGGATGGGACTATCTGAAAA AGGTGATGGCCGATGAAGGCATGGTCACCTTGCGCGGGGCAGATCAGGCGACGATTGCGGCGGCCAAATCCGAGCTGAGC GACTTTGACCCCAGGCTTCACGTCTGGGACCTGTTTATGGCCGATGCCGAAACCATTCGCAGGGTCTGTGACCCCATCGT TCAAAACAGCCTTCCTGCCGGCATGAGACAAATCTCCGAGGCTGAAATGACCCCAGAAAAAGCCAGGGAGGTTCAGGTCT TTTTGACCCAGCAGGGGGTCTCGCCTTTCTCGACAGATGCGCTTTTGGGGAGGTTGTTTCCCGCCAGATTAATCGCGCTG CAAAACGCAAGCGACAGGATCGCCGCCGCTGGATTTGCAGCCATGACGCACAATCGCCATAGCCCGTTCTTCAACTCGGC TTGGGTGGGACTGATTGCGGTTGATCCCGAACTGCGGGGGCTCGGGCTTGGGAAACATGTGGATGCGATATGCAACCTCG TGGCCGTGACTGAACTTGGCGCGGCCGCCACGATGGAGTTTGTTGCGCCGGACAATGCCCCCTCACGGGCCATGCTCGAA AGCTGCGGCCTGAGGCAGGTTGAAGGCAAATCGGTGGTTATGTTCTCCACATCCACCGACCGCCTCACGCGCTAG
Upstream 100 bases:
>100_bases GCATCATTTCTGGTATGCTTTGCTTGGCATGAACCGCGGGGGCTTACCCCTTCGGCCTCGCCCACTGATCATCAGAGGGC CAGGAGCGAAAGGTATCAAC
Downstream 100 bases:
>100_bases TCCCCGATCTTTTCAGAGGAGAAACCATGCCAGCCTTTCTGTCTTTTCGCTCCGTCGTTGATCCTGCCGATTGCGATTTT CTCGGGCATATGAACGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MDRSPYYGTDKIMALQRARDAQVADFADLAGAVIHARTFSSDDPAALGWDYLKKVMADEGMVTLRGADQATIAAAKSELS DFDPRLHVWDLFMADAETIRRVCDPIVQNSLPAGMRQISEAEMTPEKAREVQVFLTQQGVSPFSTDALLGRLFPARLIAL QNASDRIAAAGFAAMTHNRHSPFFNSAWVGLIAVDPELRGLGLGKHVDAICNLVAVTELGAAATMEFVAPDNAPSRAMLE SCGLRQVEGKSVVMFSTSTDRLTR
Sequences:
>Translated_264_residues MDRSPYYGTDKIMALQRARDAQVADFADLAGAVIHARTFSSDDPAALGWDYLKKVMADEGMVTLRGADQATIAAAKSELS DFDPRLHVWDLFMADAETIRRVCDPIVQNSLPAGMRQISEAEMTPEKAREVQVFLTQQGVSPFSTDALLGRLFPARLIAL QNASDRIAAAGFAAMTHNRHSPFFNSAWVGLIAVDPELRGLGLGKHVDAICNLVAVTELGAAATMEFVAPDNAPSRAMLE SCGLRQVEGKSVVMFSTSTDRLTR >Mature_264_residues MDRSPYYGTDKIMALQRARDAQVADFADLAGAVIHARTFSSDDPAALGWDYLKKVMADEGMVTLRGADQATIAAAKSELS DFDPRLHVWDLFMADAETIRRVCDPIVQNSLPAGMRQISEAEMTPEKAREVQVFLTQQGVSPFSTDALLGRLFPARLIAL QNASDRIAAAGFAAMTHNRHSPFFNSAWVGLIAVDPELRGLGLGKHVDAICNLVAVTELGAAATMEFVAPDNAPSRAMLE SCGLRQVEGKSVVMFSTSTDRLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28616; Mature: 28616
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRSPYYGTDKIMALQRARDAQVADFADLAGAVIHARTFSSDDPAALGWDYLKKVMADEG CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCC MVTLRGADQATIAAAKSELSDFDPRLHVWDLFMADAETIRRVCDPIVQNSLPAGMRQISE EEEEECCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AEMTPEKAREVQVFLTQQGVSPFSTDALLGRLFPARLIALQNASDRIAAAGFAAMTHNRH HHCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC SPFFNSAWVGLIAVDPELRGLGLGKHVDAICNLVAVTELGAAATMEFVAPDNAPSRAMLE CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHH SCGLRQVEGKSVVMFSTSTDRLTR HCCCEEECCCEEEEEECCCHHHCC >Mature Secondary Structure MDRSPYYGTDKIMALQRARDAQVADFADLAGAVIHARTFSSDDPAALGWDYLKKVMADEG CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCC MVTLRGADQATIAAAKSELSDFDPRLHVWDLFMADAETIRRVCDPIVQNSLPAGMRQISE EEEEECCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AEMTPEKAREVQVFLTQQGVSPFSTDALLGRLFPARLIALQNASDRIAAAGFAAMTHNRH HHCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC SPFFNSAWVGLIAVDPELRGLGLGKHVDAICNLVAVTELGAAATMEFVAPDNAPSRAMLE CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHH SCGLRQVEGKSVVMFSTSTDRLTR HCCCEEECCCEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA