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The map label for this gene is dppC [H]

Identifier: 99081663

GI number: 99081663

Start: 1916613

End: 1917428

Strand: Direct

Name: dppC [H]

Synonym: TM1040_1822

Alternate gene names: 99081663

Gene position: 1916613-1917428 (Clockwise)

Preceding gene: 99081662

Following gene: 99081664

Centisome position: 59.88

GC content: 60.78

Gene sequence:

>816_bases
ATGAAGAATATCCCCGTATCCGCTCTGATCGGGCTGTTTTTCACGGCCCTCTACTTTCTCGGCGCACTTTTTGCGCCGCT
CCTGGCCCCCTATGGCATGGCCGAAGTGGTCGGCGACGTTTGGGAACCCTCCAGCGCCGACTACTGGCTGGGCACCGACA
ATATCGGACGCGATCTGTTGTCGCGGATGATCTATGGCGGGCGCACCACCATCTTCATCGCCACCATGGCGACGCTGATC
TCCTTCACCACCGGATCCATCCTCGGGATCTTTGCAGCCGTCTCCGGCGGGTGGATCGACCAGACACTGTCGCGCTTTGT
CGATCTCATCATGTCGATCCCGACACTGATCTTTGCGCTTGTTGTGCTCTCGGTGACGCCTGTGACCGTGCCGATGCTGA
TCCTCGTGATGGGTCTTTTGGACTCCACACGCGTGTTCCGCCTCGCCCGCGCCGTTGCTGTCGACATCGAGGTGATGGAC
TTTGTGGAAGCCGCACGCCTGCGCGGTGAGAAGACCGCGTGGATCATCTTCCGCGAGATCCTGCCCAATGCGCTGTCGCC
ACTGGTGGCAGAGATGGGGCTGCGCTTCATCTTTATGGTGCTCTTTGTGTCCACCCTCTCCTTCCTGGGTCTGGGCGTGC
AGCCCCCCGAGGCTGATTGGGGCGGCATCGTGAAGGAAAACAAGGACGGTATCGTCTATGGCGTGCCCGCCGCGCTGATC
CCCGCCTTTGCCATCGCAACCCTTGCGATCTCGGTGAACCTGGTGGCGGACTGGATCCTGAACCGTACCACATCGCTGAA
AGGAGGCCGGGGATGA

Upstream 100 bases:

>100_bases
TGCAGGCCTGTGGTCTGATCTTTGCCACCGTCTATATCGGCCTCAACATGGTTGCCGATATCGTGTCGATCCTGTCGAAC
CCGCGTCTGAGGCATCCGAA

Downstream 100 bases:

>100_bases
GCGAACCACTCCTCAAGGTCCGCGACCTGAAAATCGGCGCCACGGTTTATCCGCCGGGCGAGAAACCCCATGACATCGAA
ATCGTGCATGGCGTCAGCTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKNIPVSALIGLFFTALYFLGALFAPLLAPYGMAEVVGDVWEPSSADYWLGTDNIGRDLLSRMIYGGRTTIFIATMATLI
SFTTGSILGIFAAVSGGWIDQTLSRFVDLIMSIPTLIFALVVLSVTPVTVPMLILVMGLLDSTRVFRLARAVAVDIEVMD
FVEAARLRGEKTAWIIFREILPNALSPLVAEMGLRFIFMVLFVSTLSFLGLGVQPPEADWGGIVKENKDGIVYGVPAALI
PAFAIATLAISVNLVADWILNRTTSLKGGRG

Sequences:

>Translated_271_residues
MKNIPVSALIGLFFTALYFLGALFAPLLAPYGMAEVVGDVWEPSSADYWLGTDNIGRDLLSRMIYGGRTTIFIATMATLI
SFTTGSILGIFAAVSGGWIDQTLSRFVDLIMSIPTLIFALVVLSVTPVTVPMLILVMGLLDSTRVFRLARAVAVDIEVMD
FVEAARLRGEKTAWIIFREILPNALSPLVAEMGLRFIFMVLFVSTLSFLGLGVQPPEADWGGIVKENKDGIVYGVPAALI
PAFAIATLAISVNLVADWILNRTTSLKGGRG
>Mature_271_residues
MKNIPVSALIGLFFTALYFLGALFAPLLAPYGMAEVVGDVWEPSSADYWLGTDNIGRDLLSRMIYGGRTTIFIATMATLI
SFTTGSILGIFAAVSGGWIDQTLSRFVDLIMSIPTLIFALVVLSVTPVTVPMLILVMGLLDSTRVFRLARAVAVDIEVMD
FVEAARLRGEKTAWIIFREILPNALSPLVAEMGLRFIFMVLFVSTLSFLGLGVQPPEADWGGIVKENKDGIVYGVPAALI
PAFAIATLAISVNLVADWILNRTTSLKGGRG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=252, Percent_Identity=28.5714285714286, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787760, Length=228, Percent_Identity=31.140350877193, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789964, Length=244, Percent_Identity=33.6065573770492, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1787549, Length=259, Percent_Identity=29.7297297297297, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1787498, Length=257, Percent_Identity=28.4046692607004, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789889, Length=212, Percent_Identity=28.7735849056604, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788505, Length=190, Percent_Identity=27.3684210526316, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29236; Mature: 29236

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIPVSALIGLFFTALYFLGALFAPLLAPYGMAEVVGDVWEPSSADYWLGTDNIGRDLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCCHHHHHHH
SRMIYGGRTTIFIATMATLISFTTGSILGIFAAVSGGWIDQTLSRFVDLIMSIPTLIFAL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VVLSVTPVTVPMLILVMGLLDSTRVFRLARAVAVDIEVMDFVEAARLRGEKTAWIIFREI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LPNALSPLVAEMGLRFIFMVLFVSTLSFLGLGVQPPEADWGGIVKENKDGIVYGVPAALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEECHHHHH
PAFAIATLAISVNLVADWILNRTTSLKGGRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKNIPVSALIGLFFTALYFLGALFAPLLAPYGMAEVVGDVWEPSSADYWLGTDNIGRDLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCCHHHHHHH
SRMIYGGRTTIFIATMATLISFTTGSILGIFAAVSGGWIDQTLSRFVDLIMSIPTLIFAL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VVLSVTPVTVPMLILVMGLLDSTRVFRLARAVAVDIEVMDFVEAARLRGEKTAWIIFREI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LPNALSPLVAEMGLRFIFMVLFVSTLSFLGLGVQPPEADWGGIVKENKDGIVYGVPAALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEECHHHHH
PAFAIATLAISVNLVADWILNRTTSLKGGRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]