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The map label for this gene is yrbE [C]

Identifier: 99081621

GI number: 99081621

Start: 1874309

End: 1875091

Strand: Direct

Name: yrbE [C]

Synonym: TM1040_1780

Alternate gene names: 99081621

Gene position: 1874309-1875091 (Clockwise)

Preceding gene: 99081620

Following gene: 99081622

Centisome position: 58.55

GC content: 65.13

Gene sequence:

>783_bases
ATGACCCCCACCTCCGCCCTTGGGATGATCGGCCGCGCATCGCTGGGCCGCCTCGCCGCCCTCGGGCGGATCACGCGCTT
TGCCGCCTCAACCTTCAGCCACATGCTGCGTCCGCCCTTTTACCCGCGCGAATTGGCAAATGCGCTGTTGCAGGTGGGCT
GGCTCAGCCTGCCGGTGGTGGCGCTAACCGCGATCTTTACCGGCGGCGCGCTGGCGCTCCAGATCTATGCGGGCGGTGCG
CGTTTCAACGCCGAGGCCGTGGTGCCGCAGATTGTTGCCATCGGCATGGTACGCGAGCTTGGCCCGGTCCTTGTAGGCCT
GATGATTGCGGCGCGCGTGACCTCGTCCATTGCCGCCGAAATCGCCACGATGCGCGTGACCGAGCAGATCGACGCGCTGG
TGACGCTCTCGACCAATCCGATGAAATACCTTGTCGCCCCGCGCGTGCTTGCCGCCCTCCTCACGGTGCCGGTTCTGGTC
GGCGTCGGAGACATCATCGGCATCATGGGCGGCTATGTGGTGGCCACCGAAACCCTGGATTTCAACGCCGCCGCCTACCT
CAAGAACACAGTCGACTTTCTTGAGCTGCGCGACATCGTCTCCTCCCTCGTGAAGGGCGCAGCCTTCGGCACTATCGCCG
CCCTCATGGGATGCTACTACGGCATGCAATCGGGCCGCGGCGCCCAAGGTGTCGGGCGTGCGACCAAGGGATCGGTCGAG
GCCGCCGCCGTGCTGATCCTTGCAGCCAACTTCGTGCTCACGGGGGTGTTTTTCTCGCTATGA

Upstream 100 bases:

>100_bases
ATGAGACGCAGACCGTGGATGTGCTGGCAAACGCCGCTGATACCATCGGCTATGAGGTCCTGACCTCGCTCGGCAACCGC
TATGCGAGGACCTACAGCGC

Downstream 100 bases:

>100_bases
CCCATCCGATGATCGAAATGCGCGAGGTCGCCAAGGCCTTTGGCTCAAACGCTGTTTTGCGCGGTGTGGATCTGGAGGTC
GCCAAGGGCTCCTCGCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTPTSALGMIGRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVVALTAIFTGGALALQIYAGGA
RFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLV
GVGDIIGIMGGYVVATETLDFNAAAYLKNTVDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVE
AAAVLILAANFVLTGVFFSL

Sequences:

>Translated_260_residues
MTPTSALGMIGRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVVALTAIFTGGALALQIYAGGA
RFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLV
GVGDIIGIMGGYVVATETLDFNAAAYLKNTVDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVE
AAAVLILAANFVLTGVFFSL
>Mature_259_residues
TPTSALGMIGRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVVALTAIFTGGALALQIYAGGAR
FNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLVG
VGDIIGIMGGYVVATETLDFNAAAYLKNTVDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEA
AAVLILAANFVLTGVFFSL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=260, Percent_Identity=28.0769230769231, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26977; Mature: 26846

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTSALGMIGRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ALTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAE
HHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATETLD
HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
FNAAAYLKNTVDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
AAAVLILAANFVLTGVFFSL
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPTSALGMIGRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ALTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAE
HHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATETLD
HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
FNAAAYLKNTVDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
AAAVLILAANFVLTGVFFSL
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA