| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081601
Identifier: 99081601
GI number: 99081601
Start: 1851155
End: 1851559
Strand: Direct
Name: 99081601
Synonym: TM1040_1760
Alternate gene names: NA
Gene position: 1851155-1851559 (Clockwise)
Preceding gene: 99081600
Following gene: 99081602
Centisome position: 57.83
GC content: 61.23
Gene sequence:
>405_bases ATGAGCGTTATCGTAACCGACACGGGCTTTGCCCATGACGACTGGACCGGCGGCTTTGAGGGTGCAAATGTGCTTGATCT GGCCTCCGACACAGACCCTGCCACGCTGAAGGACCAGCTGGACGGCGTCGAGATGATCCGCGTTGATTTTCCCTCTTTTG CGGATGGGCGCGGGTTCACCATTGCGCGCATGCTGCGCCTCATGGGATATGACGGCCGTCTGCGCGCCAAGGGTCATGTG ATCTCGGATCAATATGCCATGGCGCGCCGGGTTGGATTTGACGAGGTGGAAATCTCTGACGATCTGGCCACCCGCCAGCC CGAAGGCGAATGGCTGTTCCGCGCCAACTGGCAGAGCCACAACTACCAGGCACGCCTGCGCGCGCATTCCAACGCCGCGC GCTAA
Upstream 100 bases:
>100_bases GCGAAGACCCCCGCGCCGGTCGCTGGCGCAACCAGAACAAGGAAGAATGCGGCATCCACGTTGTGGATGGCAAATTCGTC CGTACAGGAGCTTGAGTAAT
Downstream 100 bases:
>100_bases GCCAGCCCGAAGACCCGTCGTCAGCCCCCCCGCCCCAGCTGCGCGCGCAGTGGATCGCCTAGGGGCACCCCAAGGGCCCG TTCTGCGCAAGAGTGTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSVIVTDTGFAHDDWTGGFEGANVLDLASDTDPATLKDQLDGVEMIRVDFPSFADGRGFTIARMLRLMGYDGRLRAKGHV ISDQYAMARRVGFDEVEISDDLATRQPEGEWLFRANWQSHNYQARLRAHSNAAR
Sequences:
>Translated_134_residues MSVIVTDTGFAHDDWTGGFEGANVLDLASDTDPATLKDQLDGVEMIRVDFPSFADGRGFTIARMLRLMGYDGRLRAKGHV ISDQYAMARRVGFDEVEISDDLATRQPEGEWLFRANWQSHNYQARLRAHSNAAR >Mature_133_residues SVIVTDTGFAHDDWTGGFEGANVLDLASDTDPATLKDQLDGVEMIRVDFPSFADGRGFTIARMLRLMGYDGRLRAKGHVI SDQYAMARRVGFDEVEISDDLATRQPEGEWLFRANWQSHNYQARLRAHSNAAR
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15036; Mature: 14905
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIVTDTGFAHDDWTGGFEGANVLDLASDTDPATLKDQLDGVEMIRVDFPSFADGRGFT CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCH IARMLRLMGYDGRLRAKGHVISDQYAMARRVGFDEVEISDDLATRQPEGEWLFRANWQSH HHHHHHHHCCCCCEEECCCEECHHHHHHHHCCCCCEEECCCHHCCCCCCCEEEEECCCCC NYQARLRAHSNAAR CEEEEEEECCCCCC >Mature Secondary Structure SVIVTDTGFAHDDWTGGFEGANVLDLASDTDPATLKDQLDGVEMIRVDFPSFADGRGFT EEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCH IARMLRLMGYDGRLRAKGHVISDQYAMARRVGFDEVEISDDLATRQPEGEWLFRANWQSH HHHHHHHHCCCCCEEECCCEECHHHHHHHHCCCCCEEECCCHHCCCCCCCEEEEECCCCC NYQARLRAHSNAAR CEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA