| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is fpr [H]
Identifier: 99081602
GI number: 99081602
Start: 1851726
End: 1852598
Strand: Direct
Name: fpr [H]
Synonym: TM1040_1761
Alternate gene names: 99081602
Gene position: 1851726-1852598 (Clockwise)
Preceding gene: 99081601
Following gene: 99081604
Centisome position: 57.85
GC content: 59.56
Gene sequence:
>873_bases ATGATGAACGAGATTACGCCCGTGAGTGAGCCTGTGACCGAAGCCGCCGCGCCTGCAAAGGCCAAACCCGCCCTGCCCGA CGCCCAGACCGTGACGCAAGTGAAACACTGGACTGACCGGCTGTTTTCCTTCCGCTGCACCCGGCCTGCCTCCCTGCGGT TCCGCTCGGGCGAGTTTGTGATGATCGGCCTGATGGGCGACCCGGACCCAAAGACCGGCAAGCAAAAGCCCCTGCTGCGC GCCTATTCCATCGCATCGCCCTCCTGGGACGAGGAAATGGAGTTCTACTCCATCAAGGTTCAGGACGGCCCGCTCACCTC GAAACTGCAGCACATCAAGGTTGGCGATGAAATCATCCTGCGCCCCAAACCAGTGGGCACGCTGGTGCACGATGCGCTTT TGCCCGGCAAACGGATCTGGTTCTTTGCAACCGGCACCGGTTTTGCGCCCTTCGCCTCCCTGCTGCGCGAGCCGCAGACC TATGAGGATTATGATGAGGTCATCATCACCCACACCTGCCGCGAGGTAGGCGAGCTGACCTATGGCCGCGAGCTGATCGA GAGCTTGAAGGAAGACGAGCTCCTCAATGAGGTGATTGGCGAAGGATTCTGGAAGAAGATCAAATACTACCCGACCACCA CCCGAGAAGAGAGCGCCAAGATGGGCCGCATCACCGACCTGATGCGCTCGGGCGAGGCCTTTGCAGATCTGGGCGTGCCG CCGCTGAACCCGGAAAGCGACCGCGCAATGATCTGCGGCAACCTTGCTTTCAACCTCGAGCTCAAGGATCTCTTCGAGAA TACCTATGGCCTGGAAGAAGGTGCCAATTCCAAGCCTGCGCATTTTGTGGTGGAAAAAGCCTTCCTCGACTGA
Upstream 100 bases:
>100_bases ACCCCAAGGGCCCGTTCTGCGCAAGAGTGTCGCAGGAGGGGTTCCCCTGACCTAGATCAAAGATTAATCAGAGGTGCCGG TTTATCCCACCGGCAGAGAC
Downstream 100 bases:
>100_bases GGAGGCTTTGACAGCGTCTTACAAGAACGCCCCCGCACGCATGCTGCGGGGGCGTTTTCTATTTAGAACAGAGCCTTGCT GACACAGCTCAATAGAAAAC
Product: ferredoxin--NADP(+) reductase
Products: NA
Alternate protein names: FNR; Protein X [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFVMIGLMGDPDPKTGKQKPLLR AYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQT YEDYDEVIITHTCREVGELTYGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD
Sequences:
>Translated_290_residues MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFVMIGLMGDPDPKTGKQKPLLR AYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQT YEDYDEVIITHTCREVGELTYGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD >Mature_290_residues MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFVMIGLMGDPDPKTGKQKPLLR AYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQT YEDYDEVIITHTCREVGELTYGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD
Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790359, Length=257, Percent_Identity=28.7937743190661, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 32549; Mature: 32549
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFV CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCCEE MIGLMGDPDPKTGKQKPLLRAYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIIL EEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHEECCCEEEE RPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQTYEDYDEVIITHTCREVGELT CCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP HHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD CCCCCCCCEEEECCEEEEEEHHHHHHHHCCCCCCCCCCCHHEEHHHHHCC >Mature Secondary Structure MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFV CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCCEE MIGLMGDPDPKTGKQKPLLRAYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIIL EEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHEECCCEEEE RPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQTYEDYDEVIITHTCREVGELT CCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP HHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD CCCCCCCCEEEECCEEEEEEHHHHHHHHCCCCCCCCCCCHHEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7673160; 8034707; 9865948 [H]