Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is fpr [H]

Identifier: 99081602

GI number: 99081602

Start: 1851726

End: 1852598

Strand: Direct

Name: fpr [H]

Synonym: TM1040_1761

Alternate gene names: 99081602

Gene position: 1851726-1852598 (Clockwise)

Preceding gene: 99081601

Following gene: 99081604

Centisome position: 57.85

GC content: 59.56

Gene sequence:

>873_bases
ATGATGAACGAGATTACGCCCGTGAGTGAGCCTGTGACCGAAGCCGCCGCGCCTGCAAAGGCCAAACCCGCCCTGCCCGA
CGCCCAGACCGTGACGCAAGTGAAACACTGGACTGACCGGCTGTTTTCCTTCCGCTGCACCCGGCCTGCCTCCCTGCGGT
TCCGCTCGGGCGAGTTTGTGATGATCGGCCTGATGGGCGACCCGGACCCAAAGACCGGCAAGCAAAAGCCCCTGCTGCGC
GCCTATTCCATCGCATCGCCCTCCTGGGACGAGGAAATGGAGTTCTACTCCATCAAGGTTCAGGACGGCCCGCTCACCTC
GAAACTGCAGCACATCAAGGTTGGCGATGAAATCATCCTGCGCCCCAAACCAGTGGGCACGCTGGTGCACGATGCGCTTT
TGCCCGGCAAACGGATCTGGTTCTTTGCAACCGGCACCGGTTTTGCGCCCTTCGCCTCCCTGCTGCGCGAGCCGCAGACC
TATGAGGATTATGATGAGGTCATCATCACCCACACCTGCCGCGAGGTAGGCGAGCTGACCTATGGCCGCGAGCTGATCGA
GAGCTTGAAGGAAGACGAGCTCCTCAATGAGGTGATTGGCGAAGGATTCTGGAAGAAGATCAAATACTACCCGACCACCA
CCCGAGAAGAGAGCGCCAAGATGGGCCGCATCACCGACCTGATGCGCTCGGGCGAGGCCTTTGCAGATCTGGGCGTGCCG
CCGCTGAACCCGGAAAGCGACCGCGCAATGATCTGCGGCAACCTTGCTTTCAACCTCGAGCTCAAGGATCTCTTCGAGAA
TACCTATGGCCTGGAAGAAGGTGCCAATTCCAAGCCTGCGCATTTTGTGGTGGAAAAAGCCTTCCTCGACTGA

Upstream 100 bases:

>100_bases
ACCCCAAGGGCCCGTTCTGCGCAAGAGTGTCGCAGGAGGGGTTCCCCTGACCTAGATCAAAGATTAATCAGAGGTGCCGG
TTTATCCCACCGGCAGAGAC

Downstream 100 bases:

>100_bases
GGAGGCTTTGACAGCGTCTTACAAGAACGCCCCCGCACGCATGCTGCGGGGGCGTTTTCTATTTAGAACAGAGCCTTGCT
GACACAGCTCAATAGAAAAC

Product: ferredoxin--NADP(+) reductase

Products: NA

Alternate protein names: FNR; Protein X [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFVMIGLMGDPDPKTGKQKPLLR
AYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQT
YEDYDEVIITHTCREVGELTYGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP
PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD

Sequences:

>Translated_290_residues
MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFVMIGLMGDPDPKTGKQKPLLR
AYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQT
YEDYDEVIITHTCREVGELTYGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP
PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD
>Mature_290_residues
MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFVMIGLMGDPDPKTGKQKPLLR
AYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQT
YEDYDEVIITHTCREVGELTYGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP
PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD

Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790359, Length=257, Percent_Identity=28.7937743190661, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 32549; Mature: 32549

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFV
CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCCEE
MIGLMGDPDPKTGKQKPLLRAYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIIL
EEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHEECCCEEEE
RPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQTYEDYDEVIITHTCREVGELT
CCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP
HHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC
PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD
CCCCCCCCEEEECCEEEEEEHHHHHHHHCCCCCCCCCCCHHEEHHHHHCC
>Mature Secondary Structure
MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSFRCTRPASLRFRSGEFV
CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEECCCEE
MIGLMGDPDPKTGKQKPLLRAYSIASPSWDEEMEFYSIKVQDGPLTSKLQHIKVGDEIIL
EEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHEECCCEEEE
RPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQTYEDYDEVIITHTCREVGELT
CCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREESAKMGRITDLMRSGEAFADLGVP
HHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC
PLNPESDRAMICGNLAFNLELKDLFENTYGLEEGANSKPAHFVVEKAFLD
CCCCCCCCEEEECCEEEEEEHHHHHHHHCCCCCCCCCCCHHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7673160; 8034707; 9865948 [H]