| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is cysH [H]
Identifier: 99081600
GI number: 99081600
Start: 1850388
End: 1851149
Strand: Direct
Name: cysH [H]
Synonym: TM1040_1759
Alternate gene names: 99081600
Gene position: 1850388-1851149 (Clockwise)
Preceding gene: 99081599
Following gene: 99081601
Centisome position: 57.81
GC content: 62.47
Gene sequence:
>762_bases ATGACCCGTATAGATCAGGAGATCAGGGGCCATCCCGCCGCTGCTGGCAGCGCTGAGGCCCTGGCCGAGCAGGTTGCGGC GCTCAATGCCCGCTTCAAACACCACTCGGCCACCTCCGTGATGGAAGGGGCGCTGCGGGATGCTGGCAATATCGCGCTGG TGTCGTCCTTTGGGGCGGAATCGGTGGTGCTGTTGCATATGGCCGCCGTGATCGACCCCTCGGTGCCGGTGCTCTTTGTG GACACGGAACTCTTGTTCACAGAGACGCTGGTCTACCAGCAAGAAGTGAGCGAGCGCCTAGGCCTCAGGAATGTGCATGT CATCAAGGCGGATGACATCGCCGAAAAAGACCCCTATGGCGCGATGCGGTTTTCCGACACCGACGCCTGCTGCACCCTGC GCAAGACCATTCCGCTGCAAAAGGCGCTCGCCGGCTATGACGGCTGGATCACCGGGCGCAAACGGTTTCAGTCCGGCACC CGCGCCGCGCTCGACTTCTTTGAGGTCGAGGATGGCACCGGACGAATGAAGATCAACCCACTGGCCCATTGGGCGCCCGA AGACGTGCGCGCCTATATGGATGAAAACCGCCTGCCCCGTCACCCGCTGGTGGCCAAGGGCTATCCATCGATCGGCTGCG AACCCTGCACCAGCCCGGTCGCAGAAGGCGAAGACCCCCGCGCCGGTCGCTGGCGCAACCAGAACAAGGAAGAATGCGGC ATCCACGTTGTGGATGGCAAATTCGTCCGTACAGGAGCTTGA
Upstream 100 bases:
>100_bases GAGCGCCGAAGAAGAGTTCCTGCAAACCTACCGCCGCGTCGGCATGGAGCCCTTCAAGGCGGCGCTCTACCCGGCCTCCG AGAAAAAGGTGGCCTGAGGG
Downstream 100 bases:
>100_bases GTAATATGAGCGTTATCGTAACCGACACGGGCTTTGCCCATGACGACTGGACCGGCGGCTTTGAGGGTGCAAATGTGCTT GATCTGGCCTCCGACACAGA
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTRIDQEIRGHPAAAGSAEALAEQVAALNARFKHHSATSVMEGALRDAGNIALVSSFGAESVVLLHMAAVIDPSVPVLFV DTELLFTETLVYQQEVSERLGLRNVHVIKADDIAEKDPYGAMRFSDTDACCTLRKTIPLQKALAGYDGWITGRKRFQSGT RAALDFFEVEDGTGRMKINPLAHWAPEDVRAYMDENRLPRHPLVAKGYPSIGCEPCTSPVAEGEDPRAGRWRNQNKEECG IHVVDGKFVRTGA
Sequences:
>Translated_253_residues MTRIDQEIRGHPAAAGSAEALAEQVAALNARFKHHSATSVMEGALRDAGNIALVSSFGAESVVLLHMAAVIDPSVPVLFV DTELLFTETLVYQQEVSERLGLRNVHVIKADDIAEKDPYGAMRFSDTDACCTLRKTIPLQKALAGYDGWITGRKRFQSGT RAALDFFEVEDGTGRMKINPLAHWAPEDVRAYMDENRLPRHPLVAKGYPSIGCEPCTSPVAEGEDPRAGRWRNQNKEECG IHVVDGKFVRTGA >Mature_252_residues TRIDQEIRGHPAAAGSAEALAEQVAALNARFKHHSATSVMEGALRDAGNIALVSSFGAESVVLLHMAAVIDPSVPVLFVD TELLFTETLVYQQEVSERLGLRNVHVIKADDIAEKDPYGAMRFSDTDACCTLRKTIPLQKALAGYDGWITGRKRFQSGTR AALDFFEVEDGTGRMKINPLAHWAPEDVRAYMDENRLPRHPLVAKGYPSIGCEPCTSPVAEGEDPRAGRWRNQNKEECGI HVVDGKFVRTGA
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=226, Percent_Identity=30.0884955752212, Blast_Score=92, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6325425, Length=204, Percent_Identity=34.8039215686275, Blast_Score=113, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 27701; Mature: 27569
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIDQEIRGHPAAAGSAEALAEQVAALNARFKHHSATSVMEGALRDAGNIALVSSFGAE CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC SVVLLHMAAVIDPSVPVLFVDTELLFTETLVYQQEVSERLGLRNVHVIKADDIAEKDPYG HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC AMRFSDTDACCTLRKTIPLQKALAGYDGWITGRKRFQSGTRAALDFFEVEDGTGRMKINP CEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCHHHEEEEEECCCCCEEEECC LAHWAPEDVRAYMDENRLPRHPLVAKGYPSIGCEPCTSPVAEGEDPRAGRWRNQNKEECG CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC IHVVDGKFVRTGA EEEECCEEEECCC >Mature Secondary Structure TRIDQEIRGHPAAAGSAEALAEQVAALNARFKHHSATSVMEGALRDAGNIALVSSFGAE CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC SVVLLHMAAVIDPSVPVLFVDTELLFTETLVYQQEVSERLGLRNVHVIKADDIAEKDPYG HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC AMRFSDTDACCTLRKTIPLQKALAGYDGWITGRKRFQSGTRAALDFFEVEDGTGRMKINP CEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCHHHEEEEEECCCCCEEEECC LAHWAPEDVRAYMDENRLPRHPLVAKGYPSIGCEPCTSPVAEGEDPRAGRWRNQNKEECG CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC IHVVDGKFVRTGA EEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]