Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081598

Identifier: 99081598

GI number: 99081598

Start: 1848404

End: 1848724

Strand: Direct

Name: 99081598

Synonym: TM1040_1757

Alternate gene names: NA

Gene position: 1848404-1848724 (Clockwise)

Preceding gene: 99081597

Following gene: 99081599

Centisome position: 57.75

GC content: 58.57

Gene sequence:

>321_bases
ATGGCCCGTGCATTCACCCCCAAAGTTGTCACCGCCAATCACTTGCTGGAGGGCGATGTGATTTACCTCACAGCTGAAAA
TGACTGGACCCGCGCTTTGAGCGAGGCGGAATTGATCACCGATGAAGCGGAGGCGCAGTTGCGTCTTCTGGAGGCCCAGA
GCCAGGCTCAGATTGCCGTTGGTGCCTATCTCGCGGATGCGAAAGCCGGGGAACAGGGTCCGGAACCCACTCATTTCCGC
GAAGAATTCCGCCGCACCGGCCCGTCGAACTATGCCCACGGCAAGCAGGAAGCCAAACTGGAGGCCACCGCAAATGTATA
A

Upstream 100 bases:

>100_bases
ATCTGGCCGCTGCGCACTTCAGCGGCCCGGCGCTCACCTTCCTTGGGCTTGCGCCGCGACAGGCGGCCGCCCTTACCGAC
ATTCAGATGGAGCTTGCCTG

Downstream 100 bases:

>100_bases
GTACAACGACTTCGACTCCGCCTTTCTCGCAGAGCGCAATCGCCAGTTCCGTGCCCAGGTGGAGCGCCGCATCGCGGGCG
CGCTGACCGAGGATGAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MARAFTPKVVTANHLLEGDVIYLTAENDWTRALSEAELITDEAEAQLRLLEAQSQAQIAVGAYLADAKAGEQGPEPTHFR
EEFRRTGPSNYAHGKQEAKLEATANV

Sequences:

>Translated_106_residues
MARAFTPKVVTANHLLEGDVIYLTAENDWTRALSEAELITDEAEAQLRLLEAQSQAQIAVGAYLADAKAGEQGPEPTHFR
EEFRRTGPSNYAHGKQEAKLEATANV
>Mature_105_residues
ARAFTPKVVTANHLLEGDVIYLTAENDWTRALSEAELITDEAEAQLRLLEAQSQAQIAVGAYLADAKAGEQGPEPTHFRE
EFRRTGPSNYAHGKQEAKLEATANV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11610; Mature: 11479

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAFTPKVVTANHLLEGDVIYLTAENDWTRALSEAELITDEAEAQLRLLEAQSQAQIAV
CCCCCCCCEEECCCEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEHH
GAYLADAKAGEQGPEPTHFREEFRRTGPSNYAHGKQEAKLEATANV
HHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
ARAFTPKVVTANHLLEGDVIYLTAENDWTRALSEAELITDEAEAQLRLLEAQSQAQIAV
CCCCCCCEEECCCEECCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEHH
GAYLADAKAGEQGPEPTHFREEFRRTGPSNYAHGKQEAKLEATANV
HHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA