The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081579

Identifier: 99081579

GI number: 99081579

Start: 1833164

End: 1833802

Strand: Reverse

Name: 99081579

Synonym: TM1040_1738

Alternate gene names: NA

Gene position: 1833802-1833164 (Counterclockwise)

Preceding gene: 99081580

Following gene: 99081578

Centisome position: 57.29

GC content: 60.09

Gene sequence:

>639_bases
ATGATCAGGACATTTGCCACCCTTGCCGTTCTTGCTGCGCCGCTTCCTGTGCTGGCGCACCCGCATATTTTTGTCGATAG
CGGTCTCAAACTCGAGGTGGACGCCGAGGGCTTTCTCAAAGCTGCCGAAGTGACCTGGGTCTATGATGACTTTTACACGC
TTCTTGTCTTCGAAGACATGATGCTCGACAGCGATTTCGACGGCGCGCTGACGCCCGCTGAACTCGAGCGGTTGAAGGGA
TTTGATCTCAACTGGGTCGAGGGCTACGAGGGCGATCTCTATCTCACCCAGCGCGACACGCAACTCAGTCTTGGCGCGCC
AGAGCATCTGAGCACCGAGGTCCGCGATGGCGTGATCATCACCCGGCATCGGCGCCCGGTGACAGAACCTGTCCCGGTTT
TGGCCAATGGGGTGACGGCGCGGATGTATGATCCGACCTATTACACCGCATATGATCTGAACCGAGGGGTCGAGATCACC
GGGCCCTGCGCCGCGCAGGTGACGCCGCCCAATCTGGATCAGGCCTACACATTGGTCGAAGAGCTGCTCTATTCGATGCC
CACCGAGCAGGCCGAGGACGCGTTCCCGGAGGTTGGCTCCGCGTTTGCATCCACCGTCGCCGTGGCGTGTGAGGGCTGA

Upstream 100 bases:

>100_bases
CTGAGGCGCTGCACGTGCCAGTGGCGAATTCCGGCACACCCGGCGGGGGCCGGGGTTTCCGCCCTTGAAGCACTGCAGAC
AGTTCTCTAGCGTCGCGGTC

Downstream 100 bases:

>100_bases
GAGGGTGCGGCACCTCCCAGGGATTGTGTTGGCGATCACGCTGGTTGCCCTTGCTGCGCTTGCGATCTGGCTCTGGGGGC
TTGGCGGCGCGGATCATATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MIRTFATLAVLAAPLPVLAHPHIFVDSGLKLEVDAEGFLKAAEVTWVYDDFYTLLVFEDMMLDSDFDGALTPAELERLKG
FDLNWVEGYEGDLYLTQRDTQLSLGAPEHLSTEVRDGVIITRHRRPVTEPVPVLANGVTARMYDPTYYTAYDLNRGVEIT
GPCAAQVTPPNLDQAYTLVEELLYSMPTEQAEDAFPEVGSAFASTVAVACEG

Sequences:

>Translated_212_residues
MIRTFATLAVLAAPLPVLAHPHIFVDSGLKLEVDAEGFLKAAEVTWVYDDFYTLLVFEDMMLDSDFDGALTPAELERLKG
FDLNWVEGYEGDLYLTQRDTQLSLGAPEHLSTEVRDGVIITRHRRPVTEPVPVLANGVTARMYDPTYYTAYDLNRGVEIT
GPCAAQVTPPNLDQAYTLVEELLYSMPTEQAEDAFPEVGSAFASTVAVACEG
>Mature_212_residues
MIRTFATLAVLAAPLPVLAHPHIFVDSGLKLEVDAEGFLKAAEVTWVYDDFYTLLVFEDMMLDSDFDGALTPAELERLKG
FDLNWVEGYEGDLYLTQRDTQLSLGAPEHLSTEVRDGVIITRHRRPVTEPVPVLANGVTARMYDPTYYTAYDLNRGVEIT
GPCAAQVTPPNLDQAYTLVEELLYSMPTEQAEDAFPEVGSAFASTVAVACEG

Specific function: Unknown

COG id: COG3683

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23354; Mature: 23354

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTFATLAVLAAPLPVLAHPHIFVDSGLKLEVDAEGFLKAAEVTWVYDDFYTLLVFEDM
CCCHHHHHHHHHCCCCHHCCCEEEECCCCEEEECCCCCEEEEEEEEEEHHHHEEEHHHHH
MLDSDFDGALTPAELERLKGFDLNWVEGYEGDLYLTQRDTQLSLGAPEHLSTEVRDGVII
HHCCCCCCCCCHHHHHHHCCCCCCEECCCCCCEEEEECCCEEECCCCHHHHHHHHCCEEE
TRHRRPVTEPVPVLANGVTARMYDPTYYTAYDLNRGVEITGPCAAQVTPPNLDQAYTLVE
EECCCCCCCCCCHHCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHH
ELLYSMPTEQAEDAFPEVGSAFASTVAVACEG
HHHHHCCCCHHHHHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MIRTFATLAVLAAPLPVLAHPHIFVDSGLKLEVDAEGFLKAAEVTWVYDDFYTLLVFEDM
CCCHHHHHHHHHCCCCHHCCCEEEECCCCEEEECCCCCEEEEEEEEEEHHHHEEEHHHHH
MLDSDFDGALTPAELERLKGFDLNWVEGYEGDLYLTQRDTQLSLGAPEHLSTEVRDGVII
HHCCCCCCCCCHHHHHHHCCCCCCEECCCCCCEEEEECCCEEECCCCHHHHHHHHCCEEE
TRHRRPVTEPVPVLANGVTARMYDPTYYTAYDLNRGVEITGPCAAQVTPPNLDQAYTLVE
EECCCCCCCCCCHHCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHH
ELLYSMPTEQAEDAFPEVGSAFASTVAVACEG
HHHHHCCCCHHHHHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA