Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081580

Identifier: 99081580

GI number: 99081580

Start: 1833899

End: 1834507

Strand: Reverse

Name: 99081580

Synonym: TM1040_1739

Alternate gene names: NA

Gene position: 1834507-1833899 (Counterclockwise)

Preceding gene: 99081582

Following gene: 99081579

Centisome position: 57.31

GC content: 62.07

Gene sequence:

>609_bases
ATGGCATGGATCAAGACGGTCGCATTCGGCGACGCCACGGGAAAACTGCGCAAACTCTATGATCGGGTGACTGGCCCCGG
CGGCAATGTCGACAATATCATGATGGCGCATTCATTGCGCCCGCACACGATGGAAGGGCATATGGCCCTTTACAAGAACG
TCCTGCACCACAGCGGCAACGAGCTGCCCAAATGGGTGCTCGAGATGATTGGCGTCTGGGTGTCCTCTCTCAACGGCTGT
GCCTATTGCGTGGAGCATCATTTTGCCGGGCTGAAACGGCTGATGCGGGACGATGCGCGTGCCGAAGCCATCCGCGCCGC
GATCGAGGCGCGCGACATCAAGGCCCTGCCGGTGCGCGCCTGCGAGATGGCCGCGATGGATTATGCCCGGAAACTGACGC
AGGCCCCGACCGAGATGATGGCCGCGGATCTCGAGCCCCTGCGCGCAGAAGGGCTGAGCGATGGTCATATCCTCGAAATC
AATCAGGTGGTGGCCTATTTCGCCTATGCCAATCGCACGGTGCTCGGGCTGGGCTGCTCGACCGAAGGCGACGTTCTCGG
CCTTAGCCCCGGCAACAGTGACGACCCCACGGATTGGGGGCACGCCTGA

Upstream 100 bases:

>100_bases
GAACACAGGTCTGACGAAATGTGATCAAATCCAGCGCGCTTAACAATTGAAACATCACACTGTGGCAATAGGATGGATCT
CGCATCAGAGGAGGTTGTCG

Downstream 100 bases:

>100_bases
GGCGCTGCACGTGCCAGTGGCGAATTCCGGCACACCCGGCGGGGGCCGGGGTTTCCGCCCTTGAAGCACTGCAGACAGTT
CTCTAGCGTCGCGGTCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase; Peroxidase-Like; Peroxidase-Related Protein; Peroxidase-Related

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MAWIKTVAFGDATGKLRKLYDRVTGPGGNVDNIMMAHSLRPHTMEGHMALYKNVLHHSGNELPKWVLEMIGVWVSSLNGC
AYCVEHHFAGLKRLMRDDARAEAIRAAIEARDIKALPVRACEMAAMDYARKLTQAPTEMMAADLEPLRAEGLSDGHILEI
NQVVAYFAYANRTVLGLGCSTEGDVLGLSPGNSDDPTDWGHA

Sequences:

>Translated_202_residues
MAWIKTVAFGDATGKLRKLYDRVTGPGGNVDNIMMAHSLRPHTMEGHMALYKNVLHHSGNELPKWVLEMIGVWVSSLNGC
AYCVEHHFAGLKRLMRDDARAEAIRAAIEARDIKALPVRACEMAAMDYARKLTQAPTEMMAADLEPLRAEGLSDGHILEI
NQVVAYFAYANRTVLGLGCSTEGDVLGLSPGNSDDPTDWGHA
>Mature_201_residues
AWIKTVAFGDATGKLRKLYDRVTGPGGNVDNIMMAHSLRPHTMEGHMALYKNVLHHSGNELPKWVLEMIGVWVSSLNGCA
YCVEHHFAGLKRLMRDDARAEAIRAAIEARDIKALPVRACEMAAMDYARKLTQAPTEMMAADLEPLRAEGLSDGHILEIN
QVVAYFAYANRTVLGLGCSTEGDVLGLSPGNSDDPTDWGHA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22104; Mature: 21972

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWIKTVAFGDATGKLRKLYDRVTGPGGNVDNIMMAHSLRPHTMEGHMALYKNVLHHSGN
CCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
ELPKWVLEMIGVWVSSLNGCAYCVEHHFAGLKRLMRDDARAEAIRAAIEARDIKALPVRA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
CEMAAMDYARKLTQAPTEMMAADLEPLRAEGLSDGHILEINQVVAYFAYANRTVLGLGCS
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCCCCCEEHHHHHHHHHHHHCCEEEEECCC
TEGDVLGLSPGNSDDPTDWGHA
CCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AWIKTVAFGDATGKLRKLYDRVTGPGGNVDNIMMAHSLRPHTMEGHMALYKNVLHHSGN
CCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
ELPKWVLEMIGVWVSSLNGCAYCVEHHFAGLKRLMRDDARAEAIRAAIEARDIKALPVRA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
CEMAAMDYARKLTQAPTEMMAADLEPLRAEGLSDGHILEINQVVAYFAYANRTVLGLGCS
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCCCCCEEHHHHHHHHHHHHCCEEEEECCC
TEGDVLGLSPGNSDDPTDWGHA
CCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA