| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081576
Identifier: 99081576
GI number: 99081576
Start: 1830011
End: 1830427
Strand: Direct
Name: 99081576
Synonym: TM1040_1735
Alternate gene names: NA
Gene position: 1830011-1830427 (Clockwise)
Preceding gene: 99081575
Following gene: 99081581
Centisome position: 57.17
GC content: 58.75
Gene sequence:
>417_bases ATGACAACCGCCCTCCCCGAATATTACTTTCGCGTCCGCGAGAACGGCGCCATGGTGTTCCGTCTCGACACGGAGAACCG CAATCGACGCATCGAGATGGATCAGATCGCGGTGATCAATCTCAAGAAGGGAGAGATCAAACCGCATGGCGACCGAAGCC TCAGCGCTGAGGATCTCAGCGCAATCGAGGCCTGGATGGAGGAGCGCAGAACGCTCCTCGCTCAGCGCGAGATGGATGAT ATTCTACGCGCGGTGGATCACTTGAACCTCACCGCGCAATGGGCGCAGTCGCGCGCCAGTGACGCACAGTTGGAGAGGGT TACGGATACGCTGTTGATGGCCATGCATGACCTGCGCAGTGTCCTGGTCCGCAAAAAGGCGGATCGTCTGGCCAAGGCCG AAAAAGCATCTGGCTAG
Upstream 100 bases:
>100_bases TCCTGCCTCTCACGTCCTCCCTCCTCGCGCCCGCACCTCCTTGCCAGAGACCACAGGCCTGATAGGTTCGGTGCGATCGC AGATCTGGATCAGGAATGTC
Downstream 100 bases:
>100_bases CACCAAGAGAGAAATCGCCGCGCTGTCCTTGCGGCAATTGTGGTCTCGCCTTTGGGCTCGGTTGCTGGTCTAGACGGGAT CGGCCATGATCTCATCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTTALPEYYFRVRENGAMVFRLDTENRNRRIEMDQIAVINLKKGEIKPHGDRSLSAEDLSAIEAWMEERRTLLAQREMDD ILRAVDHLNLTAQWAQSRASDAQLERVTDTLLMAMHDLRSVLVRKKADRLAKAEKASG
Sequences:
>Translated_138_residues MTTALPEYYFRVRENGAMVFRLDTENRNRRIEMDQIAVINLKKGEIKPHGDRSLSAEDLSAIEAWMEERRTLLAQREMDD ILRAVDHLNLTAQWAQSRASDAQLERVTDTLLMAMHDLRSVLVRKKADRLAKAEKASG >Mature_137_residues TTALPEYYFRVRENGAMVFRLDTENRNRRIEMDQIAVINLKKGEIKPHGDRSLSAEDLSAIEAWMEERRTLLAQREMDDI LRAVDHLNLTAQWAQSRASDAQLERVTDTLLMAMHDLRSVLVRKKADRLAKAEKASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15895; Mature: 15764
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALPEYYFRVRENGAMVFRLDTENRNRRIEMDQIAVINLKKGEIKPHGDRSLSAEDLS CCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHH AIEAWMEERRTLLAQREMDDILRAVDHLNLTAQWAQSRASDAQLERVTDTLLMAMHDLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VLVRKKADRLAKAEKASG HHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTALPEYYFRVRENGAMVFRLDTENRNRRIEMDQIAVINLKKGEIKPHGDRSLSAEDLS CCCCHHHHHHHHCCCEEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHH AIEAWMEERRTLLAQREMDDILRAVDHLNLTAQWAQSRASDAQLERVTDTLLMAMHDLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VLVRKKADRLAKAEKASG HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA