| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081566
Identifier: 99081566
GI number: 99081566
Start: 1823237
End: 1823800
Strand: Direct
Name: 99081566
Synonym: TM1040_1725
Alternate gene names: NA
Gene position: 1823237-1823800 (Clockwise)
Preceding gene: 99081565
Following gene: 99081568
Centisome position: 56.96
GC content: 57.62
Gene sequence:
>564_bases ATGACTGCGTTGATTTCTCTCCATAACGCCGTGTTCAACCTGGTTGAGCGCTTGGGCGACTGGCTGATGCCGCTATTTGC CCGTTTCACTTTTGCCGCTGTGCTGCTGCTCTATTACTGGAACTCCGGGCTCACCAAGCTGGGCGATGGCCTCTTTGGGC TGTTTTCGCCCTCGATCGGTGCTTATAGCCAGATCTTTCCCAAACAACTCGAGGCCGTTGGCTACGATGTGTCCCAGTTC GGACTGTTGCAGTGGGTTGTCGTGATGGCAGGCACTTACGCCGAATTCCTGCTGCCGCTTCTGATCGTGATTGGCCTGGC CACGCGGATCGCCTCGCTTGGCATGATCGGCTTTGTGGTGGTGCAGTCGCTCACGGATGTCTACGGGCATGGTGCAACGG ATACCAAAACGCTGGGCGCCTGGTTTGATCGCTTCTCCGACAGTGTCATCATGGACCAACGTCTGCTGTGGGTCTTTGTG CTCAGCTATCTGGTGGTGAAAGGCGCAGGTGCGCTCTCTGTGGATGCGGTGCTGCGCGCCCGCCATCATCACGCTCAGGA CTGA
Upstream 100 bases:
>100_bases AAGCCGCAACACATGATTTTCCCGAATTTGACCTCAGCGTCCCCCTGACGCTTTTGATCGAGGGCTTGGCCCTCACAGAC CTCTCGCAATAGGACTTCCC
Downstream 100 bases:
>100_bases TACAGGTTTCAAATCCCTTCAGATCTGCGGCGCCTGTGATTGACCCATAGGCGCCGCTTCGTTGTCTCAGGTCCGCGTGT CAGGTCACACCGAGTGCAGC
Product: DoxX
Products: NA
Alternate protein names: DoxX Subfamily; DoxX Subfamily Protein
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTALISLHNAVFNLVERLGDWLMPLFARFTFAAVLLLYYWNSGLTKLGDGLFGLFSPSIGAYSQIFPKQLEAVGYDVSQF GLLQWVVVMAGTYAEFLLPLLIVIGLATRIASLGMIGFVVVQSLTDVYGHGATDTKTLGAWFDRFSDSVIMDQRLLWVFV LSYLVVKGAGALSVDAVLRARHHHAQD
Sequences:
>Translated_187_residues MTALISLHNAVFNLVERLGDWLMPLFARFTFAAVLLLYYWNSGLTKLGDGLFGLFSPSIGAYSQIFPKQLEAVGYDVSQF GLLQWVVVMAGTYAEFLLPLLIVIGLATRIASLGMIGFVVVQSLTDVYGHGATDTKTLGAWFDRFSDSVIMDQRLLWVFV LSYLVVKGAGALSVDAVLRARHHHAQD >Mature_186_residues TALISLHNAVFNLVERLGDWLMPLFARFTFAAVLLLYYWNSGLTKLGDGLFGLFSPSIGAYSQIFPKQLEAVGYDVSQFG LLQWVVVMAGTYAEFLLPLLIVIGLATRIASLGMIGFVVVQSLTDVYGHGATDTKTLGAWFDRFSDSVIMDQRLLWVFVL SYLVVKGAGALSVDAVLRARHHHAQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20605; Mature: 20474
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALISLHNAVFNLVERLGDWLMPLFARFTFAAVLLLYYWNSGLTKLGDGLFGLFSPSIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCCC AYSQIFPKQLEAVGYDVSQFGLLQWVVVMAGTYAEFLLPLLIVIGLATRIASLGMIGFVV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSLTDVYGHGATDTKTLGAWFDRFSDSVIMDQRLLWVFVLSYLVVKGAGALSVDAVLRA HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RHHHAQD HHHCCCC >Mature Secondary Structure TALISLHNAVFNLVERLGDWLMPLFARFTFAAVLLLYYWNSGLTKLGDGLFGLFSPSIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCCC AYSQIFPKQLEAVGYDVSQFGLLQWVVVMAGTYAEFLLPLLIVIGLATRIASLGMIGFVV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSLTDVYGHGATDTKTLGAWFDRFSDSVIMDQRLLWVFVLSYLVVKGAGALSVDAVLRA HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RHHHAQD HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA