| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081559
Identifier: 99081559
GI number: 99081559
Start: 1816511
End: 1817314
Strand: Reverse
Name: 99081559
Synonym: TM1040_1718
Alternate gene names: NA
Gene position: 1817314-1816511 (Counterclockwise)
Preceding gene: 99081560
Following gene: 99081556
Centisome position: 56.77
GC content: 61.69
Gene sequence:
>804_bases ATGCTCTCGAGGCATGTGCCGGTCACGATTGCGCCGGTGCTCAACGCGGATCGGATTGAGGATGTCGCGGCCACGCTTTT GACGCATATGCCAGAGAAGTTCACCGTGCTTGGGGCCGGCCTCGGCGGATCGATTGCGATGGCGATGCTGGCTGCGCAAC CCGGACGTATCGCGGGTATCGGGCTCATCGGGTCGACGCCGCTGCCGGAAACCCCGGCCAAGGCGGCAGAACGTGAACCC TGGATCATCCGTGCGCGCACCGGACGGCTGCGCGGTGTCATGGAAGAGGTGATCCCGACGTCTAGCCTGGCACCGGGACC GTTGCGGCATCAGATCATGGGACAGCTTGCGGATATGGCAGAGGATCTGGGACCGGATGTCTTTGTGTCGCAAAGCCGGA TGTTGCAACGACGCCGAGATCAGCAAGCAACCCTGCGGCGGGCCTCGCAGCCTGGGCTGGTGATCTGCGGCGTGCATGAC CAGATCACGCCTGTGAAACGGCAGATGATCACGGCGGAACTGATGCAGAATGCCCGGATTGAGATGATCGAGGATGCAGG GCATGTGCCATTGATGGAGCAACCCGAGCGTGTCAGCGCCATTTTGCACAATTGGATCATCGGAGATCACGCGGTTTGCC CTCTGACCGGAGAGCTGGCAGAGCCGGTTGATGAACCTCTTTGGGTCAGTCGCCGTTCGCGGCGCCAGACCGCAGCACCG GTGATCGCGCACGCGGATACGCCCATGCAAGAGCTGTCAGAGGACGTGTTGCATTTGTCTGCGAATTATCGCGCAAGCGC TTGA
Upstream 100 bases:
>100_bases GCAGATACATATGATTGAACCAGCGCAGTTGTTGGCGCATCCTTTGGTGGTTGTGCCTGGATTCATGAGTGACGGACGGG TCTGGGAACCCCAGGTCCGA
Downstream 100 bases:
>100_bases GATTTATTGCTTGTCTGCGGTCAGCGCCCTGCGTTCGGCCTTGGACAACACATGTGGCTCTGCCACTGGTCGCCCGCTCT GACCGTCAAAAAACGCGGTT
Product: alpha/beta fold family hydrolase/acetyltransferase
Products: NA
Alternate protein names: Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Hydrolase Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Family Protein; Hydrolase Or Acyltransferase; Alpha/Beta Family Hydrolase; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Lipolytic; Alpha/Beta Fold Family Hydrolase/Acetyltransferase; Hydrolase Alpha; Alpha/Beta Hydrolase Superfamily Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLSRHVPVTIAPVLNADRIEDVAATLLTHMPEKFTVLGAGLGGSIAMAMLAAQPGRIAGIGLIGSTPLPETPAKAAEREP WIIRARTGRLRGVMEEVIPTSSLAPGPLRHQIMGQLADMAEDLGPDVFVSQSRMLQRRRDQQATLRRASQPGLVICGVHD QITPVKRQMITAELMQNARIEMIEDAGHVPLMEQPERVSAILHNWIIGDHAVCPLTGELAEPVDEPLWVSRRSRRQTAAP VIAHADTPMQELSEDVLHLSANYRASA
Sequences:
>Translated_267_residues MLSRHVPVTIAPVLNADRIEDVAATLLTHMPEKFTVLGAGLGGSIAMAMLAAQPGRIAGIGLIGSTPLPETPAKAAEREP WIIRARTGRLRGVMEEVIPTSSLAPGPLRHQIMGQLADMAEDLGPDVFVSQSRMLQRRRDQQATLRRASQPGLVICGVHD QITPVKRQMITAELMQNARIEMIEDAGHVPLMEQPERVSAILHNWIIGDHAVCPLTGELAEPVDEPLWVSRRSRRQTAAP VIAHADTPMQELSEDVLHLSANYRASA >Mature_267_residues MLSRHVPVTIAPVLNADRIEDVAATLLTHMPEKFTVLGAGLGGSIAMAMLAAQPGRIAGIGLIGSTPLPETPAKAAEREP WIIRARTGRLRGVMEEVIPTSSLAPGPLRHQIMGQLADMAEDLGPDVFVSQSRMLQRRRDQQATLRRASQPGLVICGVHD QITPVKRQMITAELMQNARIEMIEDAGHVPLMEQPERVSAILHNWIIGDHAVCPLTGELAEPVDEPLWVSRRSRRQTAAP VIAHADTPMQELSEDVLHLSANYRASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29064; Mature: 29064
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRHVPVTIAPVLNADRIEDVAATLLTHMPEKFTVLGAGLGGSIAMAMLAAQPGRIAGI CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEE GLIGSTPLPETPAKAAEREPWIIRARTGRLRGVMEEVIPTSSLAPGPLRHQIMGQLADMA EEECCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH EDLGPDVFVSQSRMLQRRRDQQATLRRASQPGLVICGVHDQITPVKRQMITAELMQNARI HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCC EMIEDAGHVPLMEQPERVSAILHNWIIGDHAVCPLTGELAEPVDEPLWVSRRSRRQTAAP EEHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCC VIAHADTPMQELSEDVLHLSANYRASA EEEECCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLSRHVPVTIAPVLNADRIEDVAATLLTHMPEKFTVLGAGLGGSIAMAMLAAQPGRIAGI CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEE GLIGSTPLPETPAKAAEREPWIIRARTGRLRGVMEEVIPTSSLAPGPLRHQIMGQLADMA EEECCCCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH EDLGPDVFVSQSRMLQRRRDQQATLRRASQPGLVICGVHDQITPVKRQMITAELMQNARI HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCC EMIEDAGHVPLMEQPERVSAILHNWIIGDHAVCPLTGELAEPVDEPLWVSRRSRRQTAAP EEHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCC VIAHADTPMQELSEDVLHLSANYRASA EEEECCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA