Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081551

Identifier: 99081551

GI number: 99081551

Start: 1808313

End: 1809083

Strand: Direct

Name: 99081551

Synonym: TM1040_1710

Alternate gene names: NA

Gene position: 1808313-1809083 (Clockwise)

Preceding gene: 99081550

Following gene: 99081552

Centisome position: 56.49

GC content: 64.59

Gene sequence:

>771_bases
ATGATTGCCTCTTTGCCGATGTATGATCGCCCCGAAACCGCTGCTGCAAATGATGCCTTCTGGGCCGCGATCCGCGCCGA
ACTCGGCCACGGGCCTGAGAGCCTGACACGCGACATGGATCTGTGGCAGGTCTGGCGCGCGCCCGATCTGTTGCTGGCGC
AGACCTGTGGACTGCCGTATCGCGCGCGCCTCTACGGCGATGTGGAACTGGTGGGCACCCCCGATTACGGCCTGCCGGGC
TGTCCGGAGGGGCATTACAACAGCGTCTTGATCGCCGCAGCCGATCGCAAGGGAACGCCCCTTCGGGATTTTGCCGGGAC
CCGCTTTGCCTACAATGACTCTCTGTCGCAGTCCGGCTGGGCGGCGGCCATGATGCGGATGCGTGCAGACGATATGCTTC
CCGGCGAGCTGATCGAAACCGGCAGCCACCAGGCTTCGGCAGTCGCGGTTGCCGAAGGGCGTGCGGATTTTGCCAGTCTT
GATGCGCTCACCTATCAGATGCTGCTGGACTACGAGCCGGACCTGATGGCAGGCCTGTGCGAACTGGAACGCACCGAGCC
GACACCGGCGCTGCCGTTCATCACTGCGCTGACACAGGATGCCACCATCCTGCGCACCGCGATGGAGCGCGCGCTCGAGG
CGCTGGAGCCTGAACATCGCGAGACTCTGCACCTGAAGAAGATCGTCTCGACCACCCCGAGCGACTACCTTGCAGTGCCC
ACCCCACCGGGTCCGACACTGGTGATGGACCGTCTTGCCCGCGCGCGCTGA

Upstream 100 bases:

>100_bases
GTGACGTCGAGGAAGACGCCCTGATCCGACTGGCGGCCAATCTTCTGGGTGTCAATGACGTGGACAGCGCCATGGCGCGC
AAACGGGCGGAGGCCCACGC

Downstream 100 bases:

>100_bases
AACCACGCGCGCCACTGCCTGCGCAGCGCGCGCCGCATTTGGCGCGCACATTGCGCTTTCTGGCAGTTTCCGTAGCGAAA
TTGCCGTTTTACGCCCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIASLPMYDRPETAAANDAFWAAIRAELGHGPESLTRDMDLWQVWRAPDLLLAQTCGLPYRARLYGDVELVGTPDYGLPG
CPEGHYNSVLIAAADRKGTPLRDFAGTRFAYNDSLSQSGWAAAMMRMRADDMLPGELIETGSHQASAVAVAEGRADFASL
DALTYQMLLDYEPDLMAGLCELERTEPTPALPFITALTQDATILRTAMERALEALEPEHRETLHLKKIVSTTPSDYLAVP
TPPGPTLVMDRLARAR

Sequences:

>Translated_256_residues
MIASLPMYDRPETAAANDAFWAAIRAELGHGPESLTRDMDLWQVWRAPDLLLAQTCGLPYRARLYGDVELVGTPDYGLPG
CPEGHYNSVLIAAADRKGTPLRDFAGTRFAYNDSLSQSGWAAAMMRMRADDMLPGELIETGSHQASAVAVAEGRADFASL
DALTYQMLLDYEPDLMAGLCELERTEPTPALPFITALTQDATILRTAMERALEALEPEHRETLHLKKIVSTTPSDYLAVP
TPPGPTLVMDRLARAR
>Mature_256_residues
MIASLPMYDRPETAAANDAFWAAIRAELGHGPESLTRDMDLWQVWRAPDLLLAQTCGLPYRARLYGDVELVGTPDYGLPG
CPEGHYNSVLIAAADRKGTPLRDFAGTRFAYNDSLSQSGWAAAMMRMRADDMLPGELIETGSHQASAVAVAEGRADFASL
DALTYQMLLDYEPDLMAGLCELERTEPTPALPFITALTQDATILRTAMERALEALEPEHRETLHLKKIVSTTPSDYLAVP
TPPGPTLVMDRLARAR

Specific function: Unknown

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28033; Mature: 28033

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASLPMYDRPETAAANDAFWAAIRAELGHGPESLTRDMDLWQVWRAPDLLLAQTCGLPY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCE
RARLYGDVELVGTPDYGLPGCPEGHYNSVLIAAADRKGTPLRDFAGTRFAYNDSLSQSGW
EEEEEECEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCEEEECCCCCCCHH
AAAMMRMRADDMLPGELIETGSHQASAVAVAEGRADFASLDALTYQMLLDYEPDLMAGLC
HHHHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHH
ELERTEPTPALPFITALTQDATILRTAMERALEALEPEHRETLHLKKIVSTTPSDYLAVP
HHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC
TPPGPTLVMDRLARAR
CCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIASLPMYDRPETAAANDAFWAAIRAELGHGPESLTRDMDLWQVWRAPDLLLAQTCGLPY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCE
RARLYGDVELVGTPDYGLPGCPEGHYNSVLIAAADRKGTPLRDFAGTRFAYNDSLSQSGW
EEEEEECEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCEEEECCCCCCCHH
AAAMMRMRADDMLPGELIETGSHQASAVAVAEGRADFASLDALTYQMLLDYEPDLMAGLC
HHHHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHH
ELERTEPTPALPFITALTQDATILRTAMERALEALEPEHRETLHLKKIVSTTPSDYLAVP
HHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC
TPPGPTLVMDRLARAR
CCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA