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The map label for this gene is ymfN [C]

Identifier: 99081512

GI number: 99081512

Start: 1770902

End: 1772683

Strand: Reverse

Name: ymfN [C]

Synonym: TM1040_1671

Alternate gene names: 99081512

Gene position: 1772683-1770902 (Counterclockwise)

Preceding gene: 99081513

Following gene: 99081511

Centisome position: 55.38

GC content: 59.43

Gene sequence:

>1782_bases
ATGAGTTCCTCGGAGCGCATTGACCAGACCACGCGATACGCGCGGGATGTGGTTTCGGGAAAGATCGTAGCGGGCGCATT
CGTGCGGGCGCAATGCCAGCGGCACCTAGATGATCTGAAGCATGGCCCGGCGCGCGGGTTGCAGTGGGATATTGAGCAGG
CCGAGCGGGCCATTCGGTTCTTTCCGGCCATGTTGTCGATCACCGAAGGGGCCAAGGAGGGCGAGCCATTCAAGCTGCTG
CCCTGGCACTTGTTCGTGGTAGGGTCGATTTTCGGCTGGCGAACAGCGGAAGGTTTCATCCGGTTCCGGTTCGTGTGGCT
GGAAACCGGCAAGGGGCAAGCGAAATCGCCGCTCATGGCGGCTGTAGGTATCTATCTCAGCGGGTTCTATGGCCGGAAGC
GGGCCGAGGTCTACTGCATCGGGGAAACGAAGGACACGGCGCGGGTTATGTTCCGCGATGCGGTGGCGATGCTTCGGGCG
CCGATCCCAGGCAAAGGCGGCATGACGCTGGAAGACGCGGCGTTTGTGATCCGCGGCACCGGCGACCTTGCCTACAGCGT
CGAGCATCCCGACAGCGGATCATTCATGCGGCCCATCGCGAACAATGACAGCGTTTCGGGGCCAAAGCCGATCCTTGTGG
CTGGCGATGAGATCCACGAGATGAAAAGCGGCAAGGCGATTGAGATGTGGCGGGCCGCAGTCACCAAGAAACACGGTGAC
AGCATACTGATGCTTGGAACGAACACCCCAAGCGCAGACCAGCAGGTGGGGACGGACTACAGCGAGTTTTGCCAGAAGGT
GGTGACCGGCGACTTCACTGACGACAGCGTGTTTGCATATATCGCGCGGGTGGACGAGGGCGACGACCCGCTGGAAGACG
AAAGCTGCTGGGTTAAGGCGTTGCCCGCCCTGGGCATCACCTATCCGGTGGACAACGTGCGCAAGCTGGTAGTGACGGCG
AAACAGCAGATCAGCACGCAGCTGACCACAAAGCGCCTGTATTTCGGAATCCCGGTAGGCTCTGCAGGGTTCTGGACCTC
TGAGCAGGCATGGAAGGAAGTGCAGGGCAAGGTCGATGATGCGAAGATGATCGGCCGCCGGGCGCATTTGGCGCTCGACC
TCTCCGAGAAGAACGACCTCACCGCGCTCGCGGTGGCGTGGGAGGGCGAAAGGATCGATGTCAAATCATGGTATTGGACT
CGTGAATTTGAGATCGAAGAGCGATCAACGGCAGATGCGATCCCTTATCGCGAGTTGGAAGCGGCGGACCTGATAGAAGT
CACGCCGGGGCGCGTAATCGACTACACGTTCATTGCGGCGAAGATTATCGACTTTTGTGGACGCCACTCAGTGGTGCAGA
TGGCTATCGACAGCGCCCACATGGAAAAGCTCTGCGAGGCCTTCGATAAGGCGGGTTTCGCGTATTGGATCGAAGAAGGC
GACGACAAGCCGGGCAGCGGCCTGAAAATTGTCAGGCATAAGCAAGGCACGAACGTCAGCTTCGACGGAAAGTTCCTCTG
TATGCCGACTTCGATCACACAGCTTGAGGACCACATGCTGAAAGGCACGGTCAAGATCGATCGCAACAAGCTCACCAGCA
TCTGCGCGCGCAACGCGATCATCCGCGAGGATGGTTTCGGCAACCGGATGTTCGACAAATCACGTTCGCGGGGCCGGATC
GATGGGGTTGTCACCCTAGCGATGGCCGTAGGGTCAGCCACCGCGGCGATGAAAACGAAGTCCGGATTGGACGACTATTT
TGCTTCACTTGGGGGCGGCTAA

Upstream 100 bases:

>100_bases
GAGCAGATCGGCAAGCTGGAAAAGGCGCTCACGCTGACGCCTGAGAGCGTAGGCGCAAAAGCAGAGGCGCCGAAGAAGAC
ACCGGAAAAGACGGCAGCAG

Downstream 100 bases:

>100_bases
ATGGGTCTGCGAGATCGCTTGAAATCCATGATCATTCGCCGCTTTGGGCTGACTGATGCTCACCAGATGGGACTTCATCG
TGCCAGTGATGCGGGGGAGA

Product: phage terminase

Products: NA

Alternate protein names: Terminase; Phage Terminase; Terminase Large Subunit; Prophage; Phage Terminase-Like Protein Large Subunit; Phage Terminase-Like Protein; Phage-Related Terminase Large Subunit; Phage Terminase Protein; Phage-Terminase Large Subunit; Bacteriophage Terminase-Like Protein Large Subunit; Bacteriophage Terminase Large Subunit; Prophage LambdaSa; Terminase Large Subunit / Phage Terminase; Large Subunit Phage Terminase; Phage Related Terminase Large Sub-Unit; Terminase-Large Subunit

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MSSSERIDQTTRYARDVVSGKIVAGAFVRAQCQRHLDDLKHGPARGLQWDIEQAERAIRFFPAMLSITEGAKEGEPFKLL
PWHLFVVGSIFGWRTAEGFIRFRFVWLETGKGQAKSPLMAAVGIYLSGFYGRKRAEVYCIGETKDTARVMFRDAVAMLRA
PIPGKGGMTLEDAAFVIRGTGDLAYSVEHPDSGSFMRPIANNDSVSGPKPILVAGDEIHEMKSGKAIEMWRAAVTKKHGD
SILMLGTNTPSADQQVGTDYSEFCQKVVTGDFTDDSVFAYIARVDEGDDPLEDESCWVKALPALGITYPVDNVRKLVVTA
KQQISTQLTTKRLYFGIPVGSAGFWTSEQAWKEVQGKVDDAKMIGRRAHLALDLSEKNDLTALAVAWEGERIDVKSWYWT
REFEIEERSTADAIPYRELEAADLIEVTPGRVIDYTFIAAKIIDFCGRHSVVQMAIDSAHMEKLCEAFDKAGFAYWIEEG
DDKPGSGLKIVRHKQGTNVSFDGKFLCMPTSITQLEDHMLKGTVKIDRNKLTSICARNAIIREDGFGNRMFDKSRSRGRI
DGVVTLAMAVGSATAAMKTKSGLDDYFASLGGG

Sequences:

>Translated_593_residues
MSSSERIDQTTRYARDVVSGKIVAGAFVRAQCQRHLDDLKHGPARGLQWDIEQAERAIRFFPAMLSITEGAKEGEPFKLL
PWHLFVVGSIFGWRTAEGFIRFRFVWLETGKGQAKSPLMAAVGIYLSGFYGRKRAEVYCIGETKDTARVMFRDAVAMLRA
PIPGKGGMTLEDAAFVIRGTGDLAYSVEHPDSGSFMRPIANNDSVSGPKPILVAGDEIHEMKSGKAIEMWRAAVTKKHGD
SILMLGTNTPSADQQVGTDYSEFCQKVVTGDFTDDSVFAYIARVDEGDDPLEDESCWVKALPALGITYPVDNVRKLVVTA
KQQISTQLTTKRLYFGIPVGSAGFWTSEQAWKEVQGKVDDAKMIGRRAHLALDLSEKNDLTALAVAWEGERIDVKSWYWT
REFEIEERSTADAIPYRELEAADLIEVTPGRVIDYTFIAAKIIDFCGRHSVVQMAIDSAHMEKLCEAFDKAGFAYWIEEG
DDKPGSGLKIVRHKQGTNVSFDGKFLCMPTSITQLEDHMLKGTVKIDRNKLTSICARNAIIREDGFGNRMFDKSRSRGRI
DGVVTLAMAVGSATAAMKTKSGLDDYFASLGGG
>Mature_592_residues
SSSERIDQTTRYARDVVSGKIVAGAFVRAQCQRHLDDLKHGPARGLQWDIEQAERAIRFFPAMLSITEGAKEGEPFKLLP
WHLFVVGSIFGWRTAEGFIRFRFVWLETGKGQAKSPLMAAVGIYLSGFYGRKRAEVYCIGETKDTARVMFRDAVAMLRAP
IPGKGGMTLEDAAFVIRGTGDLAYSVEHPDSGSFMRPIANNDSVSGPKPILVAGDEIHEMKSGKAIEMWRAAVTKKHGDS
ILMLGTNTPSADQQVGTDYSEFCQKVVTGDFTDDSVFAYIARVDEGDDPLEDESCWVKALPALGITYPVDNVRKLVVTAK
QQISTQLTTKRLYFGIPVGSAGFWTSEQAWKEVQGKVDDAKMIGRRAHLALDLSEKNDLTALAVAWEGERIDVKSWYWTR
EFEIEERSTADAIPYRELEAADLIEVTPGRVIDYTFIAAKIIDFCGRHSVVQMAIDSAHMEKLCEAFDKAGFAYWIEEGD
DKPGSGLKIVRHKQGTNVSFDGKFLCMPTSITQLEDHMLKGTVKIDRNKLTSICARNAIIREDGFGNRMFDKSRSRGRID
GVVTLAMAVGSATAAMKTKSGLDDYFASLGGG

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65531; Mature: 65400

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSERIDQTTRYARDVVSGKIVAGAFVRAQCQRHLDDLKHGPARGLQWDIEQAERAIRF
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHH
FPAMLSITEGAKEGEPFKLLPWHLFVVGSIFGWRTAEGFIRFRFVWLETGKGQAKSPLMA
HHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHH
AVGIYLSGFYGRKRAEVYCIGETKDTARVMFRDAVAMLRAPIPGKGGMTLEDAAFVIRGT
HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEEC
GDLAYSVEHPDSGSFMRPIANNDSVSGPKPILVAGDEIHEMKSGKAIEMWRAAVTKKHGD
CCEEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHCCCC
SILMLGTNTPSADQQVGTDYSEFCQKVVTGDFTDDSVFAYIARVDEGDDPLEDESCWVKA
EEEEEECCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHH
LPALGITYPVDNVRKLVVTAKQQISTQLTTKRLYFGIPVGSAGFWTSEQAWKEVQGKVDD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCH
AKMIGRRAHLALDLSEKNDLTALAVAWEGERIDVKSWYWTREFEIEERSTADAIPYRELE
HHHHCCCEEEEEEECCCCCEEEEEEEECCCEEEECEEEEEEEEECCCCCCCCCCCCCCCC
AADLIEVTPGRVIDYTFIAAKIIDFCGRHSVVQMAIDSAHMEKLCEAFDKAGFAYWIEEG
CCCEEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
DDKPGSGLKIVRHKQGTNVSFDGKFLCMPTSITQLEDHMLKGTVKIDRNKLTSICARNAI
CCCCCCCCEEEEECCCCCEEECCEEEEECCCHHHHHHHHHHCEEEECHHHHHHHHHCCCE
IREDGFGNRMFDKSRSRGRIDGVVTLAMAVGSATAAMKTKSGLDDYFASLGGG
EECCCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
SSSERIDQTTRYARDVVSGKIVAGAFVRAQCQRHLDDLKHGPARGLQWDIEQAERAIRF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHH
FPAMLSITEGAKEGEPFKLLPWHLFVVGSIFGWRTAEGFIRFRFVWLETGKGQAKSPLMA
HHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHH
AVGIYLSGFYGRKRAEVYCIGETKDTARVMFRDAVAMLRAPIPGKGGMTLEDAAFVIRGT
HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEEC
GDLAYSVEHPDSGSFMRPIANNDSVSGPKPILVAGDEIHEMKSGKAIEMWRAAVTKKHGD
CCEEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHCCCC
SILMLGTNTPSADQQVGTDYSEFCQKVVTGDFTDDSVFAYIARVDEGDDPLEDESCWVKA
EEEEEECCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHH
LPALGITYPVDNVRKLVVTAKQQISTQLTTKRLYFGIPVGSAGFWTSEQAWKEVQGKVDD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCH
AKMIGRRAHLALDLSEKNDLTALAVAWEGERIDVKSWYWTREFEIEERSTADAIPYRELE
HHHHCCCEEEEEEECCCCCEEEEEEEECCCEEEECEEEEEEEEECCCCCCCCCCCCCCCC
AADLIEVTPGRVIDYTFIAAKIIDFCGRHSVVQMAIDSAHMEKLCEAFDKAGFAYWIEEG
CCCEEEECCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
DDKPGSGLKIVRHKQGTNVSFDGKFLCMPTSITQLEDHMLKGTVKIDRNKLTSICARNAI
CCCCCCCCEEEEECCCCCEEECCEEEEECCCHHHHHHHHHHCEEEECHHHHHHHHHCCCE
IREDGFGNRMFDKSRSRGRIDGVVTLAMAVGSATAAMKTKSGLDDYFASLGGG
EECCCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA