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The map label for this gene is ymfO [C]

Identifier: 99081511

GI number: 99081511

Start: 1769678

End: 1770901

Strand: Reverse

Name: ymfO [C]

Synonym: TM1040_1670

Alternate gene names: 99081511

Gene position: 1770901-1769678 (Counterclockwise)

Preceding gene: 99081512

Following gene: 99081510

Centisome position: 55.32

GC content: 58.91

Gene sequence:

>1224_bases
ATGGGTCTGCGAGATCGCTTGAAATCCATGATCATTCGCCGCTTTGGGCTGACTGATGCTCACCAGATGGGACTTCATCG
TGCCAGTGATGCGGGGGAGATCGTCACCGGGCATAGCGCGCTCGGAATTTCGACGGTTTGGGCCTGCACCAACTTGATTG
CGGGAACAATCGGCTCGCTTCCGTTGATGGTGTATCGCCGGAACGGCCAAACGCGCACCGTTGACCGCTCGCACGTCGTT
TACCGACTGCTGCATGACAGCCCGAACTATGATCAGACAGCGCTGGACTTCTGGGAATTTATGGCGGCGTCTCTGGAGCT
GTGGGGCAACGCCTACGCGCATATCTTGCGGGAAAATGGCAAGATCGTCGGCCTAGTGCCTGTCGCGCCAGATCTGATGA
GGGTTCGCCGTCTGCCGACCGGTGAAATCGAATATCGTTGGTCGGAAGATGGCAAAACCCATCGGGAGCTTGACGGCGCT
GTGCTGCACGTTCGCGGTTTTGGAGGTTCGCCGCTTGGCGGCATGTCTACCCTACAATTCGCTCGCAATGCTTTCGGCTT
GGCACGTGCGGTTGACCGAGCAGCGGGTGAGACGTTCAAGAACGGGATGCGCCCCTCTGGCGCGTTGAAATTTGACAATT
GGCTGACTGATGAGCAGCGGGCCCGGGCCAAATCCACTTTGGTTGACGACATGGTGGGGGCGCAGAACTCCGGGCGCCCA
ATTGTTCTGGAGGGTGGCACCAATTGGGTGCCATTCACGATCAACCCCGATGATGCGCAAATGCTGGAAAGCCGACGCTT
CTCGGTGGAGGAAATCTGCCGGTTTTTCGGCGTGCCGCCGCATATGGTTGGGCACACAGAGAAAAGCACGAGTTGGGGAA
CTGGCTTGGAGCAGCAAACCCTTGCGTTTCAGAAGTTCACCCTTCGCCGCCGCATCAAGCGGATTGAGCAGGCGCTGATG
AAACAGCTCCTGACCCCTGCTGAACGGGCGCGCGGGCTGATGATCGAATTCAACCTGGAAGGGCTGCTTCGCGGAGACAG
CAAGTCGCGCGCCGATTTCTACCAGTCTGGCCTGCAGAACGGCTGGCTGACCATCAATGAGGTGCGCGCGCTGGAGAACA
AGCCCCCGGTGGCGGGCGGCGAGGTGCCGCGAATGCAGATGCAGAACGTGCCGATCACCGAGGTAGGCAAGCAATTGGAG
GCTGGAAATGACGATGATGCATAA

Upstream 100 bases:

>100_bases
TGGGGTTGTCACCCTAGCGATGGCCGTAGGGTCAGCCACCGCGGCGATGAAAACGAAGTCCGGATTGGACGACTATTTTG
CTTCACTTGGGGGCGGCTAA

Downstream 100 bases:

>100_bases
GGCGGCGGCTCCGATCCTTTCGATCAAGGCACTGGACGAGGAAACCGGCGAATTCGAGGGCTACGGCAGCACTTTCGGCG
GCGAGCCTGACAGCTATGGC

Product: Phage portal protein, HK97

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MGLRDRLKSMIIRRFGLTDAHQMGLHRASDAGEIVTGHSALGISTVWACTNLIAGTIGSLPLMVYRRNGQTRTVDRSHVV
YRLLHDSPNYDQTALDFWEFMAASLELWGNAYAHILRENGKIVGLVPVAPDLMRVRRLPTGEIEYRWSEDGKTHRELDGA
VLHVRGFGGSPLGGMSTLQFARNAFGLARAVDRAAGETFKNGMRPSGALKFDNWLTDEQRARAKSTLVDDMVGAQNSGRP
IVLEGGTNWVPFTINPDDAQMLESRRFSVEEICRFFGVPPHMVGHTEKSTSWGTGLEQQTLAFQKFTLRRRIKRIEQALM
KQLLTPAERARGLMIEFNLEGLLRGDSKSRADFYQSGLQNGWLTINEVRALENKPPVAGGEVPRMQMQNVPITEVGKQLE
AGNDDDA

Sequences:

>Translated_407_residues
MGLRDRLKSMIIRRFGLTDAHQMGLHRASDAGEIVTGHSALGISTVWACTNLIAGTIGSLPLMVYRRNGQTRTVDRSHVV
YRLLHDSPNYDQTALDFWEFMAASLELWGNAYAHILRENGKIVGLVPVAPDLMRVRRLPTGEIEYRWSEDGKTHRELDGA
VLHVRGFGGSPLGGMSTLQFARNAFGLARAVDRAAGETFKNGMRPSGALKFDNWLTDEQRARAKSTLVDDMVGAQNSGRP
IVLEGGTNWVPFTINPDDAQMLESRRFSVEEICRFFGVPPHMVGHTEKSTSWGTGLEQQTLAFQKFTLRRRIKRIEQALM
KQLLTPAERARGLMIEFNLEGLLRGDSKSRADFYQSGLQNGWLTINEVRALENKPPVAGGEVPRMQMQNVPITEVGKQLE
AGNDDDA
>Mature_406_residues
GLRDRLKSMIIRRFGLTDAHQMGLHRASDAGEIVTGHSALGISTVWACTNLIAGTIGSLPLMVYRRNGQTRTVDRSHVVY
RLLHDSPNYDQTALDFWEFMAASLELWGNAYAHILRENGKIVGLVPVAPDLMRVRRLPTGEIEYRWSEDGKTHRELDGAV
LHVRGFGGSPLGGMSTLQFARNAFGLARAVDRAAGETFKNGMRPSGALKFDNWLTDEQRARAKSTLVDDMVGAQNSGRPI
VLEGGTNWVPFTINPDDAQMLESRRFSVEEICRFFGVPPHMVGHTEKSTSWGTGLEQQTLAFQKFTLRRRIKRIEQALMK
QLLTPAERARGLMIEFNLEGLLRGDSKSRADFYQSGLQNGWLTINEVRALENKPPVAGGEVPRMQMQNVPITEVGKQLEA
GNDDDA

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 45343; Mature: 45212

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRDRLKSMIIRRFGLTDAHQMGLHRASDAGEIVTGHSALGISTVWACTNLIAGTIGSL
CCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCC
PLMVYRRNGQTRTVDRSHVVYRLLHDSPNYDQTALDFWEFMAASLELWGNAYAHILRENG
EEEEEECCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIVGLVPVAPDLMRVRRLPTGEIEYRWSEDGKTHRELDGAVLHVRGFGGSPLGGMSTLQF
CEEEEECCCHHHHHHHCCCCCCEEEEECCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHH
ARNAFGLARAVDRAAGETFKNGMRPSGALKFDNWLTDEQRARAKSTLVDDMVGAQNSGRP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCE
IVLEGGTNWVPFTINPDDAQMLESRRFSVEEICRFFGVPPHMVGHTEKSTSWGTGLEQQT
EEEECCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHH
LAFQKFTLRRRIKRIEQALMKQLLTPAERARGLMIEFNLEGLLRGDSKSRADFYQSGLQN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECCEEEECCCCHHHHHHHHHCCC
GWLTINEVRALENKPPVAGGEVPRMQMQNVPITEVGKQLEAGNDDDA
CCEEHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GLRDRLKSMIIRRFGLTDAHQMGLHRASDAGEIVTGHSALGISTVWACTNLIAGTIGSL
CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCC
PLMVYRRNGQTRTVDRSHVVYRLLHDSPNYDQTALDFWEFMAASLELWGNAYAHILRENG
EEEEEECCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIVGLVPVAPDLMRVRRLPTGEIEYRWSEDGKTHRELDGAVLHVRGFGGSPLGGMSTLQF
CEEEEECCCHHHHHHHCCCCCCEEEEECCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHH
ARNAFGLARAVDRAAGETFKNGMRPSGALKFDNWLTDEQRARAKSTLVDDMVGAQNSGRP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCE
IVLEGGTNWVPFTINPDDAQMLESRRFSVEEICRFFGVPPHMVGHTEKSTSWGTGLEQQT
EEEECCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHH
LAFQKFTLRRRIKRIEQALMKQLLTPAERARGLMIEFNLEGLLRGDSKSRADFYQSGLQN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECCEEEECCCCHHHHHHHHHCCC
GWLTINEVRALENKPPVAGGEVPRMQMQNVPITEVGKQLEAGNDDDA
CCEEHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA