| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081489
Identifier: 99081489
GI number: 99081489
Start: 1752165
End: 1752485
Strand: Reverse
Name: 99081489
Synonym: TM1040_1648
Alternate gene names: NA
Gene position: 1752485-1752165 (Counterclockwise)
Preceding gene: 99081490
Following gene: 99081488
Centisome position: 54.75
GC content: 56.7
Gene sequence:
>321_bases ATGCACAGAGGGGGGATTTCAGGAGTGTTCAAATTTCGCGGTCAGCGCGCGGATTTGGTTGGCGTCCATACAGTTCCACG GATTGCCGAATTTCACGCGGTCATGCGACGCCTCCACAAGGCAAGCGTAGAGGTGCTTCCCGGCCTCTGTGGCCGCTCCC CATTTGCAATCCATGACCTTGTTTCCATCACGGTCCAGGATGCGCTCCGGGATGTAGTCCCCAGCGACATACTGGCAGAC GAGTTGCCACGGCATCGGGTAATCGTCGCTCAATTTTTCAAAGCGTTCTGCTGGTGTCATGTGGCCTCCGGGGGTTTTTA G
Upstream 100 bases:
>100_bases GCTTAAGTCGCTTCGGTGAATCTGGCACAACCTCAAAGACGAGAGCCCCGGTGAATGCCGGGGCTTTTTCGTTTCTTGAT CCGCTCTTGATCGTGCGCTG
Downstream 100 bases:
>100_bases GATTTCTTGGGGTCTACCCAATCGGTGCCCTTGTACCCGTAGGAGCAAGGCGCACCGCAACGGTAGCAGTGGGACTGTGG CATGCCGGGATAGCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDLVSITVQDALRDVVPSDILAD ELPRHRVIVAQFFKAFCWCHVASGGF
Sequences:
>Translated_106_residues MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDLVSITVQDALRDVVPSDILAD ELPRHRVIVAQFFKAFCWCHVASGGF >Mature_106_residues MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDLVSITVQDALRDVVPSDILAD ELPRHRVIVAQFFKAFCWCHVASGGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11729; Mature: 11729
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDL CCCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VSITVQDALRDVVPSDILADELPRHRVIVAQFFKAFCWCHVASGGF HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHRGGISGVFKFRGQRADLVGVHTVPRIAEFHAVMRRLHKASVEVLPGLCGRSPFAIHDL CCCCCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VSITVQDALRDVVPSDILADELPRHRVIVAQFFKAFCWCHVASGGF HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA