| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081490
Identifier: 99081490
GI number: 99081490
Start: 1752567
End: 1752965
Strand: Reverse
Name: 99081490
Synonym: TM1040_1649
Alternate gene names: NA
Gene position: 1752965-1752567 (Counterclockwise)
Preceding gene: 99081491
Following gene: 99081489
Centisome position: 54.76
GC content: 58.65
Gene sequence:
>399_bases ATGACGGGCTTGATCGCATTCCTCATGCGCATGGGGTTCGGCGGTATGGTGGACAAAGCCATCAGCCATTTGGAGCGCCG CGCGGAGCTGCAAAATGACCGCGAGAAGCTCAGAAGCCAAACGACTGTAGAGCTGGCCCGTGAGGCCGTGAAAGAAGCCC AGGTCATGGCCGACTACAATCGCGCCAAGCTTGCCTTTCCGTGGTTCTGGCTGTTCGCTGCGCTCTTCCTCGTACCCTTG GCCGCATGGTGGAACGCAGTCATTCTCGACAGCATCTTCGGCTTCACCTGGTCTGTCGCAGATCTGCCAACCCCGCAAAT GCAGGAGTGGGCCGGGGATATGATCCGTTGGCTATTCTATGTCGGCACAGGTGTCGGAGCGCTTAAGTCGCTTCGGTGA
Upstream 100 bases:
>100_bases CACAGCTTCAAGGCCCTGTTGCCTATGCCGTGGCCGCTGCGCTGCTGATTGCCGCTGTGACCGTCGCTCTGTACTTCCTG CGGTCGCAGGAGGCTGCGGC
Downstream 100 bases:
>100_bases ATCTGGCACAACCTCAAAGACGAGAGCCCCGGTGAATGCCGGGGCTTTTTCGTTTCTTGATCCGCTCTTGATCGTGCGCT GATGCACAGAGGGGGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQVMADYNRAKLAFPWFWLFAALFLVPL AAWWNAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGALKSLR
Sequences:
>Translated_132_residues MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQVMADYNRAKLAFPWFWLFAALFLVPL AAWWNAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGALKSLR >Mature_131_residues TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQVMADYNRAKLAFPWFWLFAALFLVPLA AWWNAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFYVGTGVGALKSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15073; Mature: 14942
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQVMADYN CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RAKLAFPWFWLFAALFLVPLAAWWNAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VGTGVGALKSLR HHHHHHHHHCCC >Mature Secondary Structure TGLIAFLMRMGFGGMVDKAISHLERRAELQNDREKLRSQTTVELAREAVKEAQVMADYN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RAKLAFPWFWLFAALFLVPLAAWWNAVILDSIFGFTWSVADLPTPQMQEWAGDMIRWLFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VGTGVGALKSLR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA