| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081447
Identifier: 99081447
GI number: 99081447
Start: 1716107
End: 1716403
Strand: Reverse
Name: 99081447
Synonym: TM1040_1606
Alternate gene names: NA
Gene position: 1716403-1716107 (Counterclockwise)
Preceding gene: 99081448
Following gene: 99081446
Centisome position: 53.62
GC content: 57.91
Gene sequence:
>297_bases GTGAAAGACCTGCTGTTTGCGATTGAATTCTGGCTGGCTATGGCGGCGGCAATCCTGCTGAAGCTGCGCGCCTCGCCCCA AATCACCCTATTCGGGGCTATCACCACCACCGCGTCAGCGATCTGCTGCGCTCTGGTGTTCACTGAGCCGCTTATGGATT GGCTGGAGCTTGATGGCGAGGTCTACACCTACGCAGTTTGCGCTCTGATCGCGCTGACCGGTGAGCATATCGCCCGACAG ATCCTGTCTCTTGGCATTGAGGATGCCGTCCGACTTCTGCGGGGGAACAAGAAATGA
Upstream 100 bases:
>100_bases TGCACCCTTTTCCGAAGCGCTGCGCGCCGCTGGCGTCTCGCGCATCCGCAGGCTGGCAATGGTTCTGGCCGTCACTATCC ACAAATGGAGATGAGCAACC
Downstream 100 bases:
>100_bases CGTGGGGCAAGTTTATCGTCGGGGCTTGGGGCGCCGTGCTTGCGCTGAGCCTTATGACCAGTGCGCTACCCGCGAGCTGG TGGTTTCAGGCTGGGGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKDLLFAIEFWLAMAAAILLKLRASPQITLFGAITTTASAICCALVFTEPLMDWLELDGEVYTYAVCALIALTGEHIARQ ILSLGIEDAVRLLRGNKK
Sequences:
>Translated_98_residues MKDLLFAIEFWLAMAAAILLKLRASPQITLFGAITTTASAICCALVFTEPLMDWLELDGEVYTYAVCALIALTGEHIARQ ILSLGIEDAVRLLRGNKK >Mature_98_residues MKDLLFAIEFWLAMAAAILLKLRASPQITLFGAITTTASAICCALVFTEPLMDWLELDGEVYTYAVCALIALTGEHIARQ ILSLGIEDAVRLLRGNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10742; Mature: 10742
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLLFAIEFWLAMAAAILLKLRASPQITLFGAITTTASAICCALVFTEPLMDWLELDGE CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VYTYAVCALIALTGEHIARQILSLGIEDAVRLLRGNKK HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC >Mature Secondary Structure MKDLLFAIEFWLAMAAAILLKLRASPQITLFGAITTTASAICCALVFTEPLMDWLELDGE CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VYTYAVCALIALTGEHIARQILSLGIEDAVRLLRGNKK HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA