| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081448
Identifier: 99081448
GI number: 99081448
Start: 1716410
End: 1716757
Strand: Reverse
Name: 99081448
Synonym: TM1040_1607
Alternate gene names: NA
Gene position: 1716757-1716410 (Counterclockwise)
Preceding gene: 99081449
Following gene: 99081447
Centisome position: 53.63
GC content: 61.21
Gene sequence:
>348_bases ATGACGGGTATTGGCCGCAGTAACTGGTACATCCGCCACGGGGACGGATACTTCACCACAACTGAACTCGCATGGGAGAT TGGAGCCAAGGGCTCCGGTCTCTTTATTTACGTGCCTCCGGGCTTTGCCTTTGACGTCTCGATTCCTCGCTGGGCCGGGT GGATCTTCGACCGGCACGATCCCCGCTATCTGAAAGCTGCTGCGCTGCATGATTACGCCCTCCACCGGCTCGGTTGGGGG CGGGTCAGCGCGGCTGCACCCTTTTCCGAAGCGCTGCGCGCCGCTGGCGTCTCGCGCATCCGCAGGCTGGCAATGGTTCT GGCCGTCACTATCCACAAATGGAGATGA
Upstream 100 bases:
>100_bases CTTGAAATGTGGTCCTTGGGCTCTGCCTGGATCGAACAGGTCTATGCCGCGAGTTGGGCGCTGAAGGACACGCAAGGCGG CATCCCGGCAGACTACGCCA
Downstream 100 bases:
>100_bases GCAACCGTGAAAGACCTGCTGTTTGCGATTGAATTCTGGCTGGCTATGGCGGCGGCAATCCTGCTGAAGCTGCGCGCCTC GCCCCAAATCACCCTATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTGIGRSNWYIRHGDGYFTTTELAWEIGAKGSGLFIYVPPGFAFDVSIPRWAGWIFDRHDPRYLKAAALHDYALHRLGWG RVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR
Sequences:
>Translated_115_residues MTGIGRSNWYIRHGDGYFTTTELAWEIGAKGSGLFIYVPPGFAFDVSIPRWAGWIFDRHDPRYLKAAALHDYALHRLGWG RVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR >Mature_114_residues TGIGRSNWYIRHGDGYFTTTELAWEIGAKGSGLFIYVPPGFAFDVSIPRWAGWIFDRHDPRYLKAAALHDYALHRLGWGR VSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12972; Mature: 12841
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIGRSNWYIRHGDGYFTTTELAWEIGAKGSGLFIYVPPGFAFDVSIPRWAGWIFDRHD CCCCCCCCCEEECCCCEEEHHEEEEECCCCCCCEEEEECCCCEEECCCCCHHCEEECCCC PRYLKAAALHDYALHRLGWGRVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGIGRSNWYIRHGDGYFTTTELAWEIGAKGSGLFIYVPPGFAFDVSIPRWAGWIFDRHD CCCCCCCCEEECCCCEEEHHEEEEECCCCCCCEEEEECCCCEEECCCCCHHCEEECCCC PRYLKAAALHDYALHRLGWGRVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA