Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is nadX [H]

Identifier: 99081436

GI number: 99081436

Start: 1705772

End: 1706560

Strand: Direct

Name: nadX [H]

Synonym: TM1040_1595

Alternate gene names: 99081436

Gene position: 1705772-1706560 (Clockwise)

Preceding gene: 99081427

Following gene: 99081437

Centisome position: 53.29

GC content: 64.77

Gene sequence:

>789_bases
ATGAAAATCGGCATCATCGGAGCAGGTGCCATCGCGCAATATGTCGCTCAGCAGTTGCGCCTGCGTGGGTTGGGGCCACA
TGTGATCCTTGCGCGCTCGGCGCCGCCTCCAGAGGCTCAGGAAGCGCTCGATGGCGTGGACTATGTGCAACGGGTTCAGA
ACTTGCCGCAGGATATCTCGGTGATGGTGGACTGTGCCGGACACGGTGCCCTGGTGCAGCACGGCGCGGCCCTCCTTGAA
CGCGGCATCGCACTTGTGACGCTCTCGCTTGGGGCGCTTGCCGATGACGCCCTCCATGCAGATCTGGAACGGGCGGCCCG
CGCGGGCAAGACGCGGCTGCATTTGGCAAGTGGTGCTATTGGTGCGCTCGACTGCCTGAGGGCGGCAAAGGTCGGAGGGC
TTGCCGATGTGGTCTATGTCGGGCGCAAGCCCCCCCAGGCGTGGCGGGGCTCGGTCGCCGAGCACGTTCTGGAATTGGAC
GGACTAAGAAGCCCGGCCACCCATTTTCGCGGCAGCGCCCGCGAGGCCGCCATCGCCTACCCCAAGAACGCCAATGTCGC
CGCAGCAGTGGCGCTGGCGGGAACCGGGTTTGACACCACTCGTGTTGAGCTGATTGCCGACCCAAGCGCGCGCGTGAATA
TCCACGAAATTCAAGCGCATGGCGATTTCGGCAGTTTTCATTTCCGCATCGAAGGCAATGCCCTGCCCGACAATCCGCGC
AGCTCGGCGCTGGCCGCCATGAGCGCGGTCGCCGCCATCGAGCGCGCCTGCGCCGCAATCATCACCTGA

Upstream 100 bases:

>100_bases
ACCAGATTGACCGAAACTGGATATCCAATATTCTGATACCGAAGCCGATCTGAATTCCGCTAGGCTAGGGCCAAAACAGC
AGGCAGCACAGGAGGCAGCC

Downstream 100 bases:

>100_bases
GGACCACCTATGGCCACTCGCCACACCCGTATCGTTGAACGCGCTCTGACCCGGCTCAAGCTGCGCCAACTGAGGTTGCT
TGTCGCCGTGGGCCAGCATG

Product: L-aspartate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKIGIIGAGAIAQYVAQQLRLRGLGPHVILARSAPPPEAQEALDGVDYVQRVQNLPQDISVMVDCAGHGALVQHGAALLE
RGIALVTLSLGALADDALHADLERAARAGKTRLHLASGAIGALDCLRAAKVGGLADVVYVGRKPPQAWRGSVAEHVLELD
GLRSPATHFRGSAREAAIAYPKNANVAAAVALAGTGFDTTRVELIADPSARVNIHEIQAHGDFGSFHFRIEGNALPDNPR
SSALAAMSAVAAIERACAAIIT

Sequences:

>Translated_262_residues
MKIGIIGAGAIAQYVAQQLRLRGLGPHVILARSAPPPEAQEALDGVDYVQRVQNLPQDISVMVDCAGHGALVQHGAALLE
RGIALVTLSLGALADDALHADLERAARAGKTRLHLASGAIGALDCLRAAKVGGLADVVYVGRKPPQAWRGSVAEHVLELD
GLRSPATHFRGSAREAAIAYPKNANVAAAVALAGTGFDTTRVELIADPSARVNIHEIQAHGDFGSFHFRIEGNALPDNPR
SSALAAMSAVAAIERACAAIIT
>Mature_262_residues
MKIGIIGAGAIAQYVAQQLRLRGLGPHVILARSAPPPEAQEALDGVDYVQRVQNLPQDISVMVDCAGHGALVQHGAALLE
RGIALVTLSLGALADDALHADLERAARAGKTRLHLASGAIGALDCLRAAKVGGLADVVYVGRKPPQAWRGSVAEHVLELD
GLRSPATHFRGSAREAAIAYPKNANVAAAVALAGTGFDTTRVELIADPSARVNIHEIQAHGDFGSFHFRIEGNALPDNPR
SSALAAMSAVAAIERACAAIIT

Specific function: Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate [H]

COG id: COG1712

COG function: function code R; Predicted dinucleotide-utilizing enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-aspartate dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005106
- InterPro:   IPR002811
- InterPro:   IPR011182
- InterPro:   IPR020626
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01958 DUF108; PF03447 NAD_binding_3 [H]

EC number: =1.4.1.21 [H]

Molecular weight: Translated: 27162; Mature: 27162

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGAGAIAQYVAQQLRLRGLGPHVILARSAPPPEAQEALDGVDYVQRVQNLPQDIS
CEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHE
VMVDCAGHGALVQHGAALLERGIALVTLSLGALADDALHADLERAARAGKTRLHLASGAI
EEEECCCCCHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH
GALDCLRAAKVGGLADVVYVGRKPPQAWRGSVAEHVLELDGLRSPATHFRGSAREAAIAY
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEC
PKNANVAAAVALAGTGFDTTRVELIADPSARVNIHEIQAHGDFGSFHFRIEGNALPDNPR
CCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCH
SSALAAMSAVAAIERACAAIIT
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIGIIGAGAIAQYVAQQLRLRGLGPHVILARSAPPPEAQEALDGVDYVQRVQNLPQDIS
CEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHE
VMVDCAGHGALVQHGAALLERGIALVTLSLGALADDALHADLERAARAGKTRLHLASGAI
EEEECCCCCHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH
GALDCLRAAKVGGLADVVYVGRKPPQAWRGSVAEHVLELDGLRSPATHFRGSAREAAIAY
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEC
PKNANVAAAVALAGTGFDTTRVELIADPSARVNIHEIQAHGDFGSFHFRIEGNALPDNPR
CCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCH
SSALAAMSAVAAIERACAAIIT
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA