Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is opgH [H]

Identifier: 99081376

GI number: 99081376

Start: 1640675

End: 1642567

Strand: Direct

Name: opgH [H]

Synonym: TM1040_1535

Alternate gene names: 99081376

Gene position: 1640675-1642567 (Clockwise)

Preceding gene: 99081375

Following gene: 99081379

Centisome position: 51.26

GC content: 62.92

Gene sequence:

>1893_bases
ATGAAAGACATTGGTTTTACAGATACATCCGCGCTGTTGTTGCCACCAGAGGCTCCGCTGGCGATGCCGGCGCAGGACTT
TGGACGCCAATTTCACGACGCCAGCGCGCCGGCTGCCTCCGCCCGGGATGGAACCGGCGCGGCGCTGTGGCGGGTGCTGG
CGTTTTCGCCTGCCATGGTTGCAACTCTTGCGCTTGCGTGGGTGATGCAGGGCTGGTTTGCCGCAGATGGCACCACCTCG
CTGGAGTGGGTGCTGTTGGTTCTGATTGCTTTCAACTTCTTCTGGATCACTTTCACGGTCTCGACCGTCCTGCTTGGACT
GTTCAGCCTCTCGCGCACCCGTCCGCGCCCCGAACGCGGCCTGCGCAAACCAATGCGGGTGGCCCTCTTGGTGCCAATCT
ACAACGAAGTGCCCTGGTATGTGCTTGGCAACGCGCGTTCCATGCTCGAGGAGCTGCGGGCCATCGGCGGGCCCCATCGC
TACGAGATGTTCATTCTCTCGGACACCCGCGACCCAGAGATTGCCGCACAAGAGCTGCAGAGCATCAAGGCTTTACGCGC
GGATTTGCCCGAGGGGATCACGCTCTATTATCGTCGGCGCGCCGAAAACACCGCCCGCAAGGTGGGCAATATCCATGATT
GGGTGACCCGCTGGGGCGGCAGCTATGAGGCCATGTTGGTGCTGGATGCGGACAGCCTGATGACAGGCCGCGCCATCCAG
CGCCTCACGGATGCACTGGCGCGGGACCCGGCTGCTGGTCTCATTCAGAGCTTCCCGCAACTTATTGGTGCACAATCCGT
TTTTGGCCGCATGCAACAGTTTGCCAACGGCGTATACGGCCTCGCGCTGGCCGAGGGTCTGGCGCGTTGGACTGGTCATG
AGGGCAATTACTGGGGCCACAACGCCATCATTCGCACCCGCGCCTTTGCCGCGTCGGCCGGGTTGCCGGAGCTGCGCGGG
TTCACCGGAGGCAGCAGCCTCATCATGAGCCATGATTTTGTGGAGGCAGGCTTGTTGCGACGGGCTGGCTGGCGCGTGAG
GTTCCTGCCCCGCATCCGCGGCTCCTACGAGGAAACACCGGCCACTCTGGTGGATCATATCCAGCGCGACCGGCGCTGGT
GTCAGGGCAACCTGCAACACCTGCGTCTTTTGTCGGCAACCGGGTTTCACGCGATGTCGCGGTTCCACCTCGCGCATGGT
GCCATCGGCTATCTGATGGCGCCGGTCTGGTTTGCGCTCTTGGTGATCTGGGCCGTGATCGGCCAGGACGAGGGCGGATC
AGTGATCACCTACTTCTCCGAGGCAAACCCGCTGCGGCCCAACTGGCCGGATATGAGCGAGCCACGCCATGTGGCGGTGA
TCGTCCTGATTTATGCCATGTTGCTCGCGCCCAAGGTCCTCTCTGTCGCGGCCCTGCCTCTGACCGGGCGGCGGATCGCG
GATTATGGCGGTCTGGGGCGGTTCCTTCTGTCCATGCTCACCGAAATTTTGCTTGCGATCCTCTATGCGCCGATCCTGAT
GGTTCAGCAGATGATTGCCGTGTTGCGCAGCGTCTTTGGCCTGCAAAAAGGCTGGTCCCCGCAGGCGCGCGCAGGTGGTG
AGTATAGTCTTGCAACCCTGTGCAAGTGCCACCTTCTAGAGACCGTGAGTGGCATCGCGCTCTGCATCGGGATTGCTGCG
GGCCTGGTGTCACTCTGGCTGTTGCCAATCGCACTGTCACTTGTGCTGGCCGTGCCGCTCTCTGCGATGTCGGGCCTGCG
CCTGCCGCGGGGCTGGATGGGCACGGCCGAGACCTTGAACGAGCCGCAGATCAACCGCGCGGCCCATCACTACCGCAATC
TGTTGCGGCAACACGCGCAAGGGACCGACGTGCCCGTGCAGGCCGCGGAGTGA

Upstream 100 bases:

>100_bases
CTTTGATCCGGGCGAGCAAACCCATGTGGAACTGCGCGCGCAACTGCGCAAGGATGGGCAGGATGCTTCTGAGGTCTGGC
TGTATCGGTGGACCGTCTGA

Downstream 100 bases:

>100_bases
GAGGTTCCGTGGCGTTTGCGGGGGCTCTGCCCCCGCACCCCCGGGATATTTTTCGTTAGAAGAAAAGAGGCGTCAGCCAC
CGGTCTGTGTATCAGCCACC

Product: glucosyltransferase MdoH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMVATLALAWVMQGWFAADGTTS
LEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERGLRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHR
YEMFILSDTRDPEIAAQELQSIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ
RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGHNAIIRTRAFAASAGLPELRG
FTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETPATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHG
AIGYLMAPVWFALLVIWAVIGQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA
DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATLCKCHLLETVSGIALCIGIAA
GLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLNEPQINRAAHHYRNLLRQHAQGTDVPVQAAE

Sequences:

>Translated_630_residues
MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMVATLALAWVMQGWFAADGTTS
LEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERGLRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHR
YEMFILSDTRDPEIAAQELQSIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ
RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGHNAIIRTRAFAASAGLPELRG
FTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETPATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHG
AIGYLMAPVWFALLVIWAVIGQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA
DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATLCKCHLLETVSGIALCIGIAA
GLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLNEPQINRAAHHYRNLLRQHAQGTDVPVQAAE
>Mature_630_residues
MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMVATLALAWVMQGWFAADGTTS
LEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERGLRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHR
YEMFILSDTRDPEIAAQELQSIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ
RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGHNAIIRTRAFAASAGLPELRG
FTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETPATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHG
AIGYLMAPVWFALLVIWAVIGQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA
DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATLCKCHLLETVSGIALCIGIAA
GLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLNEPQINRAAHHYRNLLRQHAQGTDVPVQAAE

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG2943

COG function: function code M; Membrane glycosyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787287, Length=551, Percent_Identity=34.3012704174229, Blast_Score=295, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 69312; Mature: 69312

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMV
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH
ATLALAWVMQGWFAADGTTSLEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHRYEMFILSDTRDPEIAAQELQ
HCCHHHEEEEEEHHCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHH
SIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEECHHHHHHHHHH
RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGH
HHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
NAIIRTRAFAASAGLPELRGFTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETP
CHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCCH
ATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHGAIGYLMAPVWFALLVIWAVI
HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA
CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
CKCHLLETVSGIALCIGIAAGLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
EPQINRAAHHYRNLLRQHAQGTDVPVQAAE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKDIGFTDTSALLLPPEAPLAMPAQDFGRQFHDASAPAASARDGTGAALWRVLAFSPAMV
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH
ATLALAWVMQGWFAADGTTSLEWVLLVLIAFNFFWITFTVSTVLLGLFSLSRTRPRPERG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LRKPMRVALLVPIYNEVPWYVLGNARSMLEELRAIGGPHRYEMFILSDTRDPEIAAQELQ
HCCHHHEEEEEEHHCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHH
SIKALRADLPEGITLYYRRRAENTARKVGNIHDWVTRWGGSYEAMLVLDADSLMTGRAIQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEECHHHHHHHHHH
RLTDALARDPAAGLIQSFPQLIGAQSVFGRMQQFANGVYGLALAEGLARWTGHEGNYWGH
HHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
NAIIRTRAFAASAGLPELRGFTGGSSLIMSHDFVEAGLLRRAGWRVRFLPRIRGSYEETP
CHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCCH
ATLVDHIQRDRRWCQGNLQHLRLLSATGFHAMSRFHLAHGAIGYLMAPVWFALLVIWAVI
HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQDEGGSVITYFSEANPLRPNWPDMSEPRHVAVIVLIYAMLLAPKVLSVAALPLTGRRIA
CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
DYGGLGRFLLSMLTEILLAILYAPILMVQQMIAVLRSVFGLQKGWSPQARAGGEYSLATL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
CKCHLLETVSGIALCIGIAAGLVSLWLLPIALSLVLAVPLSAMSGLRLPRGWMGTAETLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
EPQINRAAHHYRNLLRQHAQGTDVPVQAAE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA