| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is mdoG [H]
Identifier: 99081375
GI number: 99081375
Start: 1639148
End: 1640674
Strand: Direct
Name: mdoG [H]
Synonym: TM1040_1534
Alternate gene names: 99081375
Gene position: 1639148-1640674 (Clockwise)
Preceding gene: 99081374
Following gene: 99081376
Centisome position: 51.21
GC content: 60.84
Gene sequence:
>1527_bases ATGAGCACATTCAGCCGTCGTTCCTTCCTTCAATTCGCCTCTGCCCTGTCACTTGCGGCACTGGCCCCCGCCGCGCGCGC CAGCGCCTCCGAGGAAGCGTTTTCGCGCGCCGATGTGATTGCGCGCGCCAAGGCTCTCGCTGAACGGCCGTTCAAGGCCC GCAGCGCGGTTCCCGATGACTGGCTCGCTCTGAGTTATGACCAGTATCGCTCGATCCAGTTTGACCTCGACAAGGCGCTC TGGGCCGGCTCTGATCGCAGCTACAACGTGGATTTCTTTCTACCCGGCCTCTATTTCGAACGCCCGGTCCTCGTCCATGA AGTTGAAGACGGGATGGCGCATCGCATCCCCTTCGATTTGGGTCATTTCAAGAAACATCCCGAGATCTCACCCGATCTGT CGACCGAAGGGCCGCTGGGGTATTCGGGTTTCCGCCTGCGCACGGATCTTGGCGACCGGGATCATCCGGGAAAGAAAACC GAATTCTGCGTCTTTCAGGGCGCGAGCTACTTCCGCGCGATTGCCAATGGCAACAACTATGGTCTGTCTGCACGCGGGCT GGCGCTCAAGACGGCCGATCCCGAGGGCGAGGAATTCCCCGAATTTGTCAGCTTCTGGCTCGAAGCGCCGGGCCCCTTGC AGGAAAACATGGTGGTGCACGCGCTGATGGACAGCCCCTCGGTGACGGGCGCCTACCGGTTTGACATCACCCCCGGCACC CCTTGTGTGATGGATGTGGAAGCGACGCTCTTTGCACGCAAGGACCTGACGCATGCGGGTCTTGCACCGCTTACCTCAAT GTTCCTCTTTGATGGCACCAACCATCAGCGGTTCGATGATTTCCGCCCGGCGGTTCACGATAGCGATGGGCTCTTGATGA AAAACGGCAATGGCGAGGTCATCTGGCGACCCCTTGCAAACCCGACCCGTCTTCAGGTGTCGAGCTTCGTGGACAAGAAC CCCGCCGGTTTTGGCCTGATGCAGCGCGCGCGCAAGCTGTCGGACTTTGCCGATCTCGAAGCCCACTACCATCGCCGCCC CTCGCTCTGGGTCGAGCCCCGCGAGGATTGGGGCGCGGGAAGCGTCACCCTGGTTGAAATCCCGGCGGACAAGGAAATCT ACGACAATATCGTCGCCTATTGGCGTCCGGAAAAACCCTATCCCGCTGGCGCGCGCGTGGATCTCAACTATCGTCTGAGC TGGGGCGAAGAGCCGGTGCTGGATCTGCCGCGCGTGATCAACACCGCCTCAGGCGCCAAGATCTTTGGCGACCCCGGGCG TCTCATGGTGATCGATTTTGAGGCGCACCCGGTGTTTGAAGCCGATCCCGAGGCCTTCAGCTTGCATATCTCCTCGCCAC ATCTTGAGACATCTGATGGTGTGTTGCAGCGCAACCCGGAGACCGGCGGCATGCGACTGGCGTTCTCCTTTGATCCGGGC GAGCAAACCCATGTGGAACTGCGCGCGCAACTGCGCAAGGATGGGCAGGATGCTTCTGAGGTCTGGCTGTATCGGTGGAC CGTCTGA
Upstream 100 bases:
>100_bases TCCTTGTGACCGCGTTGGCCAATATCACTGGCTTCACTCTCATTATCGGCTGCGCTTTTGCAGCCGGCTGGTTCAAATCC CAACCCTGGAGACGCAAACG
Downstream 100 bases:
>100_bases ATGAAAGACATTGGTTTTACAGATACATCCGCGCTGTTGTTGCCACCAGAGGCTCCGCTGGCGATGCCGGCGCAGGACTT TGGACGCCAATTTCACGACG
Product: glucan biosynthesis protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MSTFSRRSFLQFASALSLAALAPAARASASEEAFSRADVIARAKALAERPFKARSAVPDDWLALSYDQYRSIQFDLDKAL WAGSDRSYNVDFFLPGLYFERPVLVHEVEDGMAHRIPFDLGHFKKHPEISPDLSTEGPLGYSGFRLRTDLGDRDHPGKKT EFCVFQGASYFRAIANGNNYGLSARGLALKTADPEGEEFPEFVSFWLEAPGPLQENMVVHALMDSPSVTGAYRFDITPGT PCVMDVEATLFARKDLTHAGLAPLTSMFLFDGTNHQRFDDFRPAVHDSDGLLMKNGNGEVIWRPLANPTRLQVSSFVDKN PAGFGLMQRARKLSDFADLEAHYHRRPSLWVEPREDWGAGSVTLVEIPADKEIYDNIVAYWRPEKPYPAGARVDLNYRLS WGEEPVLDLPRVINTASGAKIFGDPGRLMVIDFEAHPVFEADPEAFSLHISSPHLETSDGVLQRNPETGGMRLAFSFDPG EQTHVELRAQLRKDGQDASEVWLYRWTV
Sequences:
>Translated_508_residues MSTFSRRSFLQFASALSLAALAPAARASASEEAFSRADVIARAKALAERPFKARSAVPDDWLALSYDQYRSIQFDLDKAL WAGSDRSYNVDFFLPGLYFERPVLVHEVEDGMAHRIPFDLGHFKKHPEISPDLSTEGPLGYSGFRLRTDLGDRDHPGKKT EFCVFQGASYFRAIANGNNYGLSARGLALKTADPEGEEFPEFVSFWLEAPGPLQENMVVHALMDSPSVTGAYRFDITPGT PCVMDVEATLFARKDLTHAGLAPLTSMFLFDGTNHQRFDDFRPAVHDSDGLLMKNGNGEVIWRPLANPTRLQVSSFVDKN PAGFGLMQRARKLSDFADLEAHYHRRPSLWVEPREDWGAGSVTLVEIPADKEIYDNIVAYWRPEKPYPAGARVDLNYRLS WGEEPVLDLPRVINTASGAKIFGDPGRLMVIDFEAHPVFEADPEAFSLHISSPHLETSDGVLQRNPETGGMRLAFSFDPG EQTHVELRAQLRKDGQDASEVWLYRWTV >Mature_507_residues STFSRRSFLQFASALSLAALAPAARASASEEAFSRADVIARAKALAERPFKARSAVPDDWLALSYDQYRSIQFDLDKALW AGSDRSYNVDFFLPGLYFERPVLVHEVEDGMAHRIPFDLGHFKKHPEISPDLSTEGPLGYSGFRLRTDLGDRDHPGKKTE FCVFQGASYFRAIANGNNYGLSARGLALKTADPEGEEFPEFVSFWLEAPGPLQENMVVHALMDSPSVTGAYRFDITPGTP CVMDVEATLFARKDLTHAGLAPLTSMFLFDGTNHQRFDDFRPAVHDSDGLLMKNGNGEVIWRPLANPTRLQVSSFVDKNP AGFGLMQRARKLSDFADLEAHYHRRPSLWVEPREDWGAGSVTLVEIPADKEIYDNIVAYWRPEKPYPAGARVDLNYRLSW GEEPVLDLPRVINTASGAKIFGDPGRLMVIDFEAHPVFEADPEAFSLHISSPHLETSDGVLQRNPETGGMRLAFSFDPGE QTHVELRAQLRKDGQDASEVWLYRWTV
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG3131
COG function: function code P; Periplasmic glucans biosynthesis protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgD/opgG family [H]
Homologues:
Organism=Escherichia coli, GI1787286, Length=505, Percent_Identity=37.8217821782178, Blast_Score=326, Evalue=2e-90, Organism=Escherichia coli, GI145693128, Length=521, Percent_Identity=37.236084452975, Blast_Score=299, Evalue=3e-82,
Paralogues:
None
Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014438 - InterPro: IPR007444 - InterPro: IPR011013 - InterPro: IPR014756 [H]
Pfam domain/function: PF04349 MdoG [H]
EC number: NA
Molecular weight: Translated: 56787; Mature: 56656
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFSRRSFLQFASALSLAALAPAARASASEEAFSRADVIARAKALAERPFKARSAVPDD CCCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC WLALSYDQYRSIQFDLDKALWAGSDRSYNVDFFLPGLYFERPVLVHEVEDGMAHRIPFDL CEEECHHHHCEEEEECHHHHHCCCCCCEEEEEEECCHHHCCCEEEEECCCCCHHCCCCCH GHFKKHPEISPDLSTEGPLGYSGFRLRTDLGDRDHPGKKTEFCVFQGASYFRAIANGNNY HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCC GLSARGLALKTADPEGEEFPEFVSFWLEAPGPLQENMVVHALMDSPSVTGAYRFDITPGT CEEECCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCC PCVMDVEATLFARKDLTHAGLAPLTSMFLFDGTNHQRFDDFRPAVHDSDGLLMKNGNGEV CEEEECHHHEEEHHCCCCCCHHHHHHHHEECCCCCCCCHHCCCCCCCCCCEEEECCCCCE IWRPLANPTRLQVSSFVDKNPAGFGLMQRARKLSDFADLEAHYHRRPSLWVEPREDWGAG EEEECCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC SVTLVEIPADKEIYDNIVAYWRPEKPYPAGARVDLNYRLSWGEEPVLDLPRVINTASGAK CEEEEEECCCHHHHHHHHEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCE IFGDPGRLMVIDFEAHPVFEADPEAFSLHISSPHLETSDGVLQRNPETGGMRLAFSFDPG EECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCC EQTHVELRAQLRKDGQDASEVWLYRWTV CCHHHHHHHHHHHCCCCCHHEEEEEECC >Mature Secondary Structure STFSRRSFLQFASALSLAALAPAARASASEEAFSRADVIARAKALAERPFKARSAVPDD CCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC WLALSYDQYRSIQFDLDKALWAGSDRSYNVDFFLPGLYFERPVLVHEVEDGMAHRIPFDL CEEECHHHHCEEEEECHHHHHCCCCCCEEEEEEECCHHHCCCEEEEECCCCCHHCCCCCH GHFKKHPEISPDLSTEGPLGYSGFRLRTDLGDRDHPGKKTEFCVFQGASYFRAIANGNNY HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCC GLSARGLALKTADPEGEEFPEFVSFWLEAPGPLQENMVVHALMDSPSVTGAYRFDITPGT CEEECCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCC PCVMDVEATLFARKDLTHAGLAPLTSMFLFDGTNHQRFDDFRPAVHDSDGLLMKNGNGEV CEEEECHHHEEEHHCCCCCCHHHHHHHHEECCCCCCCCHHCCCCCCCCCCEEEECCCCCE IWRPLANPTRLQVSSFVDKNPAGFGLMQRARKLSDFADLEAHYHRRPSLWVEPREDWGAG EEEECCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC SVTLVEIPADKEIYDNIVAYWRPEKPYPAGARVDLNYRLSWGEEPVLDLPRVINTASGAK CEEEEEECCCHHHHHHHHEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCE IFGDPGRLMVIDFEAHPVFEADPEAFSLHISSPHLETSDGVLQRNPETGGMRLAFSFDPG EECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCC EQTHVELRAQLRKDGQDASEVWLYRWTV CCHHHHHHHHHHHCCCCCHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA