Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99081345

Identifier: 99081345

GI number: 99081345

Start: 1609805

End: 1610020

Strand: Reverse

Name: 99081345

Synonym: TM1040_1504

Alternate gene names: NA

Gene position: 1610020-1609805 (Counterclockwise)

Preceding gene: 99081347

Following gene: 99081343

Centisome position: 50.3

GC content: 57.87

Gene sequence:

>216_bases
ATGACATCGCAACAGTTGATTGAACGTGCCTGCGATCTTGAGCAGGAGATCCGCACCGCGTCTGAGGCCGCTCGGCAGGA
TCTGCATCAAGAATTTGCACGCATTCTGCGACGGATCGAAGCGGCCGGCGTGCCGGTGCCCGGGCATCTGCGTCGCACGG
AACAAGTGCTGAACGACGAATTGGTCGAAAGCCAGTTTGACAACATGCCGATCTGA

Upstream 100 bases:

>100_bases
GATTGCCCCACCTTTTGATTTGAGTAGACTTGATCGACGCAGCGCGTGCCAGGCTGCGAATACAGGGGGCTTTGGTTGAC
CTGTAAGGGAGGAGTAACGA

Downstream 100 bases:

>100_bases
CCGGTGCTGCGTGGCCTGATGCTGCATCAGGCCACGGGTGTTCAGCGCAGGAACAGCCCGACCATCACCAGCATCAGCCC
AAGCACCGAGAGCAACAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MTSQQLIERACDLEQEIRTASEAARQDLHQEFARILRRIEAAGVPVPGHLRRTEQVLNDELVESQFDNMPI

Sequences:

>Translated_71_residues
MTSQQLIERACDLEQEIRTASEAARQDLHQEFARILRRIEAAGVPVPGHLRRTEQVLNDELVESQFDNMPI
>Mature_70_residues
TSQQLIERACDLEQEIRTASEAARQDLHQEFARILRRIEAAGVPVPGHLRRTEQVLNDELVESQFDNMPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8171; Mature: 8040

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQQLIERACDLEQEIRTASEAARQDLHQEFARILRRIEAAGVPVPGHLRRTEQVLNDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LVESQFDNMPI
HHHHHHCCCCC
>Mature Secondary Structure 
TSQQLIERACDLEQEIRTASEAARQDLHQEFARILRRIEAAGVPVPGHLRRTEQVLNDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LVESQFDNMPI
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA