The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yexA [H]

Identifier: 99081305

GI number: 99081305

Start: 1565258

End: 1565488

Strand: Reverse

Name: yexA [H]

Synonym: TM1040_1464

Alternate gene names: 99081305

Gene position: 1565488-1565258 (Counterclockwise)

Preceding gene: 161899029

Following gene: 99081304

Centisome position: 48.91

GC content: 59.31

Gene sequence:

>231_bases
ATGAAAGCACGGGTGCATGTGATGCTGAAGAACGGGGTTCTCGATCCGCAAGGAGAGGCCGTGCGTCACGCGCTTGGCGC
GCTTGGCTTTGACAAGGTCGAAGGCGTGCGTCAGGGCAAGGTGATTGACCTGGAGCTGGCCGAGGGTGCCACTGAGGCCG
ACGTGACCGAGATGTGCGAAAAGCTGCTCGCCAATACTGTCATCGAATCCTACAGCGTCGAGATCCAGTGA

Upstream 100 bases:

>100_bases
TCGCCCGCAAGCGCCGCTCCGTCGGTCTTGCGGGTTTTTCAATAGCGCAACAGGGCAGGGCGCTCATGCTCCCGCCCGCA
GGAACTTGAGGAAAGACGCG

Downstream 100 bases:

>100_bases
TGAAGGCTGCTGTCGTCGTTTTCCCCGGATCCAACTGCGACCGTGACCTTGCCGTAGCTTTTGAGCAGGCCGGTTTCGAT
GTCTCGATGGTGTGGCACAA

Product: phosphoribosylformylglycinamidine synthetase PurS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCEKLLANTVIESYSVEIQ

Sequences:

>Translated_76_residues
MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCEKLLANTVIESYSVEIQ
>Mature_76_residues
MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCEKLLANTVIESYSVEIQ

Specific function: Unknown

COG id: COG1828

COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0062 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003850
- ProDom:   PD010362 [H]

Pfam domain/function: PF02700 PurS [H]

EC number: NA

Molecular weight: Translated: 8223; Mature: 8223

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCE
CCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHH
KLLANTVIESYSVEIQ
HHHHHHHHHHHCEECC
>Mature Secondary Structure
MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCE
CCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHH
KLLANTVIESYSVEIQ
HHHHHHHHHHHCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3036807; 9384377 [H]