| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is yexA [H]
Identifier: 99081305
GI number: 99081305
Start: 1565258
End: 1565488
Strand: Reverse
Name: yexA [H]
Synonym: TM1040_1464
Alternate gene names: 99081305
Gene position: 1565488-1565258 (Counterclockwise)
Preceding gene: 161899029
Following gene: 99081304
Centisome position: 48.91
GC content: 59.31
Gene sequence:
>231_bases ATGAAAGCACGGGTGCATGTGATGCTGAAGAACGGGGTTCTCGATCCGCAAGGAGAGGCCGTGCGTCACGCGCTTGGCGC GCTTGGCTTTGACAAGGTCGAAGGCGTGCGTCAGGGCAAGGTGATTGACCTGGAGCTGGCCGAGGGTGCCACTGAGGCCG ACGTGACCGAGATGTGCGAAAAGCTGCTCGCCAATACTGTCATCGAATCCTACAGCGTCGAGATCCAGTGA
Upstream 100 bases:
>100_bases TCGCCCGCAAGCGCCGCTCCGTCGGTCTTGCGGGTTTTTCAATAGCGCAACAGGGCAGGGCGCTCATGCTCCCGCCCGCA GGAACTTGAGGAAAGACGCG
Downstream 100 bases:
>100_bases TGAAGGCTGCTGTCGTCGTTTTCCCCGGATCCAACTGCGACCGTGACCTTGCCGTAGCTTTTGAGCAGGCCGGTTTCGAT GTCTCGATGGTGTGGCACAA
Product: phosphoribosylformylglycinamidine synthetase PurS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCEKLLANTVIESYSVEIQ
Sequences:
>Translated_76_residues MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCEKLLANTVIESYSVEIQ >Mature_76_residues MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCEKLLANTVIESYSVEIQ
Specific function: Unknown
COG id: COG1828
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0062 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003850 - ProDom: PD010362 [H]
Pfam domain/function: PF02700 PurS [H]
EC number: NA
Molecular weight: Translated: 8223; Mature: 8223
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCE CCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHH KLLANTVIESYSVEIQ HHHHHHHHHHHCEECC >Mature Secondary Structure MKARVHVMLKNGVLDPQGEAVRHALGALGFDKVEGVRQGKVIDLELAEGATEADVTEMCE CCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCCCCHHHHHH KLLANTVIESYSVEIQ HHHHHHHHHHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]