| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is purQ
Identifier: 99081304
GI number: 99081304
Start: 1564590
End: 1565258
Strand: Reverse
Name: purQ
Synonym: TM1040_1463
Alternate gene names: 99081304
Gene position: 1565258-1564590 (Counterclockwise)
Preceding gene: 99081305
Following gene: 99081303
Centisome position: 48.9
GC content: 62.03
Gene sequence:
>669_bases ATGAAGGCTGCTGTCGTCGTTTTCCCCGGATCCAACTGCGACCGTGACCTTGCCGTAGCTTTTGAGCAGGCCGGTTTCGA TGTCTCGATGGTGTGGCACAAGGACAGCGAACTGCCCGAGGGGGTGGACATCGTTGGCGTGCCCGGTGGGTTTTCTTATG GGGACTATCTGCGCTGCGGTGCGATCGCGGCGCAGTCACCGATCTGCAAGGCCGTGGTCGCGCATGCCGAGCGCGGCGGA TATGCGCTTGGGGTCTGCAACGGGTTTCAGATCCTGACCGAGACCGGCGTTCTGCCCGGCGCACTGCTGCGCAATGCGGG GCTCAAATATATCTGCAAGACCGTCGACCTGGCGGTTGCGACCTCCGACAGTGCCTTCACCCAAGGTTACAACGCAGGCG ATGTGATCGGCGTGCCGATCGCGCATCACGATGGCAACTACTATGCGGATGACGCCACGGTTCAGATGCTGAAGGATCAG GACCGCGTCGCGTTCACCTATGTGGACAATCCCAACGGTTCGGTCGCAGACATTGCGGGGATCCTGTCGGAAAACCGTCG AGTCCTGGGCATGATGCCTCACCCCGAACGCGCCGCCGACGAAGGCCATGGCGGCACCGACGGTGTGGCGATGTTCCGCG CATTGTCCGGACTTCTCACGGACGCCTGA
Upstream 100 bases:
>100_bases TGGAGCTGGCCGAGGGTGCCACTGAGGCCGACGTGACCGAGATGTGCGAAAAGCTGCTCGCCAATACTGTCATCGAATCC TACAGCGTCGAGATCCAGTG
Downstream 100 bases:
>100_bases CTTGAGCCTCAGAGGCGGTAAACCTAGTGTTGCGTCATGACTGCCTCTGAGGAGACTCCCGGCGCAAAGCCGCCTGCGCC TTCTGAACGTCGTGCTGAGC
Product: phosphoribosylformylglycinamidine synthase I
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKAAVVVFPGSNCDRDLAVAFEQAGFDVSMVWHKDSELPEGVDIVGVPGGFSYGDYLRCGAIAAQSPICKAVVAHAERGG YALGVCNGFQILTETGVLPGALLRNAGLKYICKTVDLAVATSDSAFTQGYNAGDVIGVPIAHHDGNYYADDATVQMLKDQ DRVAFTYVDNPNGSVADIAGILSENRRVLGMMPHPERAADEGHGGTDGVAMFRALSGLLTDA
Sequences:
>Translated_222_residues MKAAVVVFPGSNCDRDLAVAFEQAGFDVSMVWHKDSELPEGVDIVGVPGGFSYGDYLRCGAIAAQSPICKAVVAHAERGG YALGVCNGFQILTETGVLPGALLRNAGLKYICKTVDLAVATSDSAFTQGYNAGDVIGVPIAHHDGNYYADDATVQMLKDQ DRVAFTYVDNPNGSVADIAGILSENRRVLGMMPHPERAADEGHGGTDGVAMFRALSGLLTDA >Mature_222_residues MKAAVVVFPGSNCDRDLAVAFEQAGFDVSMVWHKDSELPEGVDIVGVPGGFSYGDYLRCGAIAAQSPICKAVVAHAERGG YALGVCNGFQILTETGVLPGALLRNAGLKYICKTVDLAVATSDSAFTQGYNAGDVIGVPIAHHDGNYYADDATVQMLKDQ DRVAFTYVDNPNGSVADIAGILSENRRVLGMMPHPERAADEGHGGTDGVAMFRALSGLLTDA
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI48994899, Length=226, Percent_Identity=32.7433628318584, Blast_Score=79, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6321498, Length=237, Percent_Identity=32.9113924050633, Blast_Score=87, Evalue=1e-18, Organism=Drosophila melanogaster, GI24582111, Length=234, Percent_Identity=29.4871794871795, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24582109, Length=234, Percent_Identity=29.4871794871795, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI17137292, Length=234, Percent_Identity=29.4871794871795, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURQ_SILST (Q1GGM0)
Other databases:
- EMBL: CP000377 - RefSeq: YP_613458.1 - ProteinModelPortal: Q1GGM0 - SMR: Q1GGM0 - STRING: Q1GGM0 - GeneID: 4077760 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_1463 - NMPDR: fig|292414.1.peg.3436 - eggNOG: COG0047 - HOGENOM: HBG302712 - OMA: FPGTNCD - ProtClustDB: PRK03619 - BioCyc: SSP292414:TM1040_1463-MONOMER - GO: GO:0005737 - HAMAP: MF_00421 - InterPro: IPR017926 - InterPro: IPR011698 - InterPro: IPR010075 - PIRSF: PIRSF001586 - TIGRFAMs: TIGR01737
Pfam domain/function: PF07685 GATase_3
EC number: =6.3.5.3
Molecular weight: Translated: 23254; Mature: 23254
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 86-86 ACT_SITE 194-194 ACT_SITE 196-196
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAVVVFPGSNCDRDLAVAFEQAGFDVSMVWHKDSELPEGVDIVGVPGGFSYGDYLRCG CCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHC AIAAQSPICKAVVAHAERGGYALGVCNGFQILTETGVLPGALLRNAGLKYICKTVDLAVA HHHCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHCCHHEEHHHHEEEEE TSDSAFTQGYNAGDVIGVPIAHHDGNYYADDATVQMLKDQDRVAFTYVDNPNGSVADIAG ECCCHHHCCCCCCCEEEEEEEECCCCEEECCHHEEEECCCCCEEEEEEECCCCCHHHHHH ILSENRRVLGMMPHPERAADEGHGGTDGVAMFRALSGLLTDA HHHCCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAAVVVFPGSNCDRDLAVAFEQAGFDVSMVWHKDSELPEGVDIVGVPGGFSYGDYLRCG CCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHC AIAAQSPICKAVVAHAERGGYALGVCNGFQILTETGVLPGALLRNAGLKYICKTVDLAVA HHHCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHCCHHEEHHHHEEEEE TSDSAFTQGYNAGDVIGVPIAHHDGNYYADDATVQMLKDQDRVAFTYVDNPNGSVADIAG ECCCHHHCCCCCCCEEEEEEEECCCCEEECCHHEEEECCCCCEEEEEEECCCCCHHHHHH ILSENRRVLGMMPHPERAADEGHGGTDGVAMFRALSGLLTDA HHHCCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA