| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is tusA [H]
Identifier: 99081299
GI number: 99081299
Start: 1556817
End: 1557053
Strand: Direct
Name: tusA [H]
Synonym: TM1040_1458
Alternate gene names: 99081299
Gene position: 1556817-1557053 (Clockwise)
Preceding gene: 99081295
Following gene: 99081307
Centisome position: 48.64
GC content: 57.38
Gene sequence:
>237_bases ATGACTGATATTGACGCCACTCTGGATGCCATCGGCCTCCTCTGCCCTCTGCCCGTACTCAAGGCGAGAAAACGTCTTCA ACCGCTTCGCGAAGGGGGTGTTCTGCGCATCCTCGCTGATGATCCGGCCGCAATCATTGATGTGCCGCATTTCTGTGCCG AAGCCGGGCATGAGTTTCTGGGAATGGAAGAGCAAGATTCCCACCAGGTGTACCTCATCCGCAAGGGCGCAGCCTGA
Upstream 100 bases:
>100_bases AAACATGACCCGTACATAGTCGCTGCGCACAACGGCGTCACCTGCACGCTGTGTCACATCCTTGTGGACAGGCTGTAACA CGCGCCTTATCTCGGAAAGC
Downstream 100 bases:
>100_bases GACCTGCGCGCCAAATGCCCGGACAACTGTACGTGGGCGCTGGCAGATCGCACACGCATACGACATGAAATGAAAAAGGC GGCCCCTGCGAAGGAGCCGC
Product: SirA-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTDIDATLDAIGLLCPLPVLKARKRLQPLREGGVLRILADDPAAIIDVPHFCAEAGHEFLGMEEQDSHQVYLIRKGAA
Sequences:
>Translated_78_residues MTDIDATLDAIGLLCPLPVLKARKRLQPLREGGVLRILADDPAAIIDVPHFCAEAGHEFLGMEEQDSHQVYLIRKGAA >Mature_77_residues TDIDATLDAIGLLCPLPVLKARKRLQPLREGGVLRILADDPAAIIDVPHFCAEAGHEFLGMEEQDSHQVYLIRKGAA
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family. TusA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789881, Length=81, Percent_Identity=45.679012345679, Blast_Score=69, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 - InterPro: IPR022931 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 8505; Mature: 8374
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIDATLDAIGLLCPLPVLKARKRLQPLREGGVLRILADDPAAIIDVPHFCAEAGHEFL CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHCCHHHC GMEEQDSHQVYLIRKGAA CCCCCCCCEEEEEECCCC >Mature Secondary Structure TDIDATLDAIGLLCPLPVLKARKRLQPLREGGVLRILADDPAAIIDVPHFCAEAGHEFL CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHCCHHHC GMEEQDSHQVYLIRKGAA CCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA