| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081307
Identifier: 99081307
GI number: 99081307
Start: 1566817
End: 1567134
Strand: Direct
Name: 99081307
Synonym: TM1040_1466
Alternate gene names: NA
Gene position: 1566817-1567134 (Clockwise)
Preceding gene: 99081299
Following gene: 99081308
Centisome position: 48.95
GC content: 59.43
Gene sequence:
>318_bases ATGACAACATTTGATGACCGCGAGAAGGCATTCGAAAACAAGTTTGCGCATGACGCTGAACTGAAGTTCCGCGCAACCGC GCGCCGCAACAAGCTGCTGGGCCTTTGGGCCGCGGATCTGTTGGGGCACAGGGACGAAGCGGCAGAAGCCTATGCCCAGA CCGTCATTATCGCCGACCTGGATGAACCGGGCGACGACGATGTCCTCGCCAAGCTCGCCACCGACCTCGAAGGCATGGTC GAACGCGCAGCCATCCGGGACAAGATGATGGAGCTGATGATGCAGGTGGCAGAAGACCTCCCCCAAACCGATACCTGA
Upstream 100 bases:
>100_bases ACCTCTCCGTCCTGATGTGCTATCCTGCGCTCAGGGCCAAGAGGGCCAAGAGCGGATATTCTGACGCCCCACTGGCCCAC TTCTTATGGGAGGACGTGAG
Downstream 100 bases:
>100_bases TCCCGGCACCCGGCCCGCGCAGATGCGTGAGGCACAGAGCTGCCGGTCCCTGAACCGGCAGGCACGCGTTCCGCAAAACG GGCGACGTCTGCTCCAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADLDEPGDDDVLAKLATDLEGMV ERAAIRDKMMELMMQVAEDLPQTDT
Sequences:
>Translated_105_residues MTTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADLDEPGDDDVLAKLATDLEGMV ERAAIRDKMMELMMQVAEDLPQTDT >Mature_104_residues TTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADLDEPGDDDVLAKLATDLEGMVE RAAIRDKMMELMMQVAEDLPQTDT
Specific function: Unknown
COG id: COG5467
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11827; Mature: 11696
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADL CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEC DEPGDDDVLAKLATDLEGMVERAAIRDKMMELMMQVAEDLPQTDT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTFDDREKAFENKFAHDAELKFRATARRNKLLGLWAADLLGHRDEAAEAYAQTVIIADL CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEC DEPGDDDVLAKLATDLEGMVERAAIRDKMMELMMQVAEDLPQTDT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA