Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081264

Identifier: 99081264

GI number: 99081264

Start: 1519788

End: 1520162

Strand: Reverse

Name: 99081264

Synonym: TM1040_1423

Alternate gene names: NA

Gene position: 1520162-1519788 (Counterclockwise)

Preceding gene: 99081265

Following gene: 99081263

Centisome position: 47.49

GC content: 62.4

Gene sequence:

>375_bases
GTGAGTGGGAAAACGTTTGAAGGACAGCTGACACGGATCGGGTGGGAGCCCGGTGCGCGGCCGCGTCCCGAACTGGTGGA
CGACATCCTCGATTATCATGGTCGCGGTGGGCGTCGTGACATCGGCCCGACGCTTCTGGGCGTTGCCTTTGGCGCACTTC
TGGGGCTGCTGCTCAAGGGCATGGCGCTGGATGGGTCGCCTTGGGGCGCGGGAACGGGGCTCTTTGGGGACGTCATCGGC
GCCATTGCGCTGTGCGGATTTCTGGGCGCGGTGCTGGTTGCGTTCTTGGCGGCGCTGCGCGCAAAGTCCCAACCAGAGCT
ATTGCAGTTTGCATCGATCAACCTGCTGACGCTGTTGATCGTTTATATGGTCTGA

Upstream 100 bases:

>100_bases
TTCAGCATCGTTAACCAATTTGCCGCGCCCCTATCGTTAACCGGTCATTAATCTGCCTTAATCAGACGTAAATCTCTCCC
TCAACACGGAGGGACATTCA

Downstream 100 bases:

>100_bases
GTTTGACCACGAGATACCCTCGGGTGGGACTGTGGGGTTGAAAGGGCGCGGCGCATAGGGCTGCGTCCTTTCTGCATCTG
GAAGTTGTGGCGGCGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSGKTFEGQLTRIGWEPGARPRPELVDDILDYHGRGGRRDIGPTLLGVAFGALLGLLLKGMALDGSPWGAGTGLFGDVIG
AIALCGFLGAVLVAFLAALRAKSQPELLQFASINLLTLLIVYMV

Sequences:

>Translated_124_residues
MSGKTFEGQLTRIGWEPGARPRPELVDDILDYHGRGGRRDIGPTLLGVAFGALLGLLLKGMALDGSPWGAGTGLFGDVIG
AIALCGFLGAVLVAFLAALRAKSQPELLQFASINLLTLLIVYMV
>Mature_123_residues
SGKTFEGQLTRIGWEPGARPRPELVDDILDYHGRGGRRDIGPTLLGVAFGALLGLLLKGMALDGSPWGAGTGLFGDVIGA
IALCGFLGAVLVAFLAALRAKSQPELLQFASINLLTLLIVYMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13008; Mature: 12876

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKTFEGQLTRIGWEPGARPRPELVDDILDYHGRGGRRDIGPTLLGVAFGALLGLLLKG
CCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MALDGSPWGAGTGLFGDVIGAIALCGFLGAVLVAFLAALRAKSQPELLQFASINLLTLLI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VYMV
HHHC
>Mature Secondary Structure 
SGKTFEGQLTRIGWEPGARPRPELVDDILDYHGRGGRRDIGPTLLGVAFGALLGLLLKG
CCCCCCCCHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MALDGSPWGAGTGLFGDVIGAIALCGFLGAVLVAFLAALRAKSQPELLQFASINLLTLLI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VYMV
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA