| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081233
Identifier: 99081233
GI number: 99081233
Start: 1485777
End: 1486391
Strand: Direct
Name: 99081233
Synonym: TM1040_1392
Alternate gene names: NA
Gene position: 1485777-1486391 (Clockwise)
Preceding gene: 99081232
Following gene: 99081234
Centisome position: 46.42
GC content: 58.37
Gene sequence:
>615_bases ATGAGTGATACATTCCTCGAGAAAACATATGAGTTGAACACAGTCGAAGAGACTGTCGATCATTACAACCGCTGGGCCGA GAGCTACGACACGGAGATTGCGGAGAACAACTACGCAACGCCGGGTCGCATTGCAGATGCACTTTGGTCCGTTCTACCGG ACGCAGAGGCGCCCCTCCTCGATTTTGGATGTGGCACCGGGCTTTCGGGGATCGCGCTGCGACGCGTCGGCTATGAGCAG ATCGACGGGATGGACCCTTCGTCAGAGATGCTGAAGGTCGCCCAAGGCAAAGGCGCCCATCGTCACCTCTCCGTTGTGGA CCCCGACAGCCGCAAACCGTTCAAATCCGGCGTCTACAAGGCCGTGGTCGCCTGCGGCGTGCTTGGGACCGGAGCCGCAC CTGCCTCGGTCTTTGGGCATCTGATGCACTGCCTCAATCGTGGCGATCTGCTGGCGTTTTCGCTGAACGATCATGCCCTT GCCGACCCCTCATATATCGGTGCCATGAACGAATGGCTTGATTGCGGGGCTGCGCGGTTGCTATTCAAGGAACATGGCCC CCACCTGCCGGGCCTCAACCTGAACGCCTGCGTCTATGTGATTGAAAAAGTGTGA
Upstream 100 bases:
>100_bases CCGCTACAAGGCCTATACCGATCGCGCCAAGGTGGCATGGCAGGAATGGCTCACAAATTTTTGATGGACGCACTCATGAT CCCGGCTCTAGACTGGGATC
Downstream 100 bases:
>100_bases CATTCACAACTCGTTTTGCCCCTTCTCCGACGGGGCCTCTGCACTTGGGCCATGCCTATTCCGCGTTGCTCGCTTCTGAT TTTGCGCGCCAGCAGAACGG
Product: methyltransferase type 11
Products: NA
Alternate protein names: Methyltransferase Domain Family
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSDTFLEKTYELNTVEETVDHYNRWAESYDTEIAENNYATPGRIADALWSVLPDAEAPLLDFGCGTGLSGIALRRVGYEQ IDGMDPSSEMLKVAQGKGAHRHLSVVDPDSRKPFKSGVYKAVVACGVLGTGAAPASVFGHLMHCLNRGDLLAFSLNDHAL ADPSYIGAMNEWLDCGAARLLFKEHGPHLPGLNLNACVYVIEKV
Sequences:
>Translated_204_residues MSDTFLEKTYELNTVEETVDHYNRWAESYDTEIAENNYATPGRIADALWSVLPDAEAPLLDFGCGTGLSGIALRRVGYEQ IDGMDPSSEMLKVAQGKGAHRHLSVVDPDSRKPFKSGVYKAVVACGVLGTGAAPASVFGHLMHCLNRGDLLAFSLNDHAL ADPSYIGAMNEWLDCGAARLLFKEHGPHLPGLNLNACVYVIEKV >Mature_203_residues SDTFLEKTYELNTVEETVDHYNRWAESYDTEIAENNYATPGRIADALWSVLPDAEAPLLDFGCGTGLSGIALRRVGYEQI DGMDPSSEMLKVAQGKGAHRHLSVVDPDSRKPFKSGVYKAVVACGVLGTGAAPASVFGHLMHCLNRGDLLAFSLNDHALA DPSYIGAMNEWLDCGAARLLFKEHGPHLPGLNLNACVYVIEKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI30795190, Length=148, Percent_Identity=31.7567567567568, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22123; Mature: 21992
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTFLEKTYELNTVEETVDHYNRWAESYDTEIAENNYATPGRIADALWSVLPDAEAPLL CCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCEE DFGCGTGLSGIALRRVGYEQIDGMDPSSEMLKVAQGKGAHRHLSVVDPDSRKPFKSGVYK ECCCCCCHHHHHHHHHCHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH AVVACGVLGTGAAPASVFGHLMHCLNRGDLLAFSLNDHALADPSYIGAMNEWLDCGAARL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LFKEHGPHLPGLNLNACVYVIEKV HHHHCCCCCCCCCCHHEEEEEECC >Mature Secondary Structure SDTFLEKTYELNTVEETVDHYNRWAESYDTEIAENNYATPGRIADALWSVLPDAEAPLL CCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCEE DFGCGTGLSGIALRRVGYEQIDGMDPSSEMLKVAQGKGAHRHLSVVDPDSRKPFKSGVYK ECCCCCCHHHHHHHHHCHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH AVVACGVLGTGAAPASVFGHLMHCLNRGDLLAFSLNDHALADPSYIGAMNEWLDCGAARL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LFKEHGPHLPGLNLNACVYVIEKV HHHHCCCCCCCCCCHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA