| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is trkG [H]
Identifier: 99081198
GI number: 99081198
Start: 1448429
End: 1449967
Strand: Reverse
Name: trkG [H]
Synonym: TM1040_1357
Alternate gene names: 99081198
Gene position: 1449967-1448429 (Counterclockwise)
Preceding gene: 99081199
Following gene: 99081197
Centisome position: 45.3
GC content: 59.71
Gene sequence:
>1539_bases ATGATACGCCGCCCCCTGAAACAAGTGCGCGGTGTGCTGCGCTTGCCGCTGCTGCTGCTCATCTGGGGGGTGTTTGCCAT TGCGATGTGGATCCCGGCCGTACATGCGGTGATTGTGGATGACCACCAGACATCGCAGAGCTTCTTTTATTCCGGGATTG TCGGGCTCACGTTGGTGGCCTTTGTGGGGCTTTCGGTTTCGAACCGCGTGCCGCGTTACGGGATGCCAGGGCAGCTTATG ACCCTGCTCGCGACTTTTGTGCTTTTGCCGCTCTACCTCGCCATTCCGCTGCAGGATGCGTTGAAAAACACAAGCTATCT CAATGCCTATTTCGATATGGTCTCGGCGCTAACGACCACGGGGGCCGATATTTTTGACCGTCCTGGACGGGTGCCGGACT CGGTGCACCTGTGGCGGGTTCTGGTGGCGTGGCTTGGCGGCATGTTCATGTGGATTGCGGCCTCAGCCGTGCTGGCGCCT CTGTCGCTCGGCGGGTTTGAGGTCACCACGCGCGCAGAACCCGGTCGCAGCGATGCAATCCTGCGCGAAAGCCAGCGCCC CGACCCGCGGCGTAAGCTGATCATCGTGACCCGTGCGCTTGCGCCGGTTTATGCGGGCCTGACCTTTGCGCTGGCTCTTT TGCTCATGCTGTGTGGCGAGAGCGGCCTTGTCGCCGTCAGCCATGCCATGTCGATCATGGCGACCTCCGGTCTGTCGCCG ATTGGCGGCATTCAGGATGCACAGGCGGGCCTCGCTGGCGAGATGATCATGTTCCTTTTTCTGCTGTTTGCGCTCTCACG CCTGACGTTTTCCAGCGATACAGTGGCTGTGGGGCATGGGCGTCTCGACAAGGATCCCGAGTTCCGCTCTGGCATTCTCA TCATTCTCGGCGTGCCGATGCTCTTGTTTCTGCGGCATTGGCTAGCCTCGCTCGAGGTGAATGCGTCTGACGATTGGGGC ATGGCGCTGACCTCTCTTTGGGGTGCGATTTTCACCGTTGCCTCATTCCTCACAACCAACGGATTTGAGAGCGCGTATTG GTTCAGCGCGCAGGAATGGTCGGGACTGGAGACACCGGGTATGATCCTGCTCGGGCTGGCGGTCATGGGCGGTGGCGTTG CGACCACTGCAGGCGGCGTAAAGCTCCTGCGTGTCTATGCGCTATATCTCAATGGTCTTCGGGAAATGGAGCGTCTGGTC CTACCGTCCTCCGTCAGTGGTGAGGGGCGGGGCAATCGACGCCTGCAGAGCAATGGTGCCTTTGTGGCCTGGATCTTTTT CATGCTCTTTGCGCTGTCCTTGACGCTCATTTCGGTGGCGCTCTCGGCCTTTGGTATTCCGTTTGAACAGGCTATGATTC TCGCCGTTGCGGGGCTTTCCACAACGGGGCCTTTGGTGGAGGCCGCAGGGCAGGTTCCCATCGAGCTCAATCTGCTGGAT GCCCCCGCAAAGCTGATCTTGTGTTTTGCGATGGTTCTGGGGCGTCTGGAAACGCTGGCCATTATCGCGCTTCTGTCGCC CAATCTTTGGCGCAACTGA
Upstream 100 bases:
>100_bases CTTCGGATCGAGGCGGGGGACACGATTGCCCTCTTTGCGATGGCCGCTGATGTGCGGGAGGTCGAGCGCCTGATGCAAGT CTCGATCGACTACTTCTAGG
Downstream 100 bases:
>100_bases CACATACTGGCTAAGTCATGCGAAAAAGTGACGTTTTTCGGGTGGAAACCCGCGAAATCTGCGTCCATACTCGCCATAAG GGACGCGTTGGGCCGCAGCG
Product: cation transporter
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MIRRPLKQVRGVLRLPLLLLIWGVFAIAMWIPAVHAVIVDDHQTSQSFFYSGIVGLTLVAFVGLSVSNRVPRYGMPGQLM TLLATFVLLPLYLAIPLQDALKNTSYLNAYFDMVSALTTTGADIFDRPGRVPDSVHLWRVLVAWLGGMFMWIAASAVLAP LSLGGFEVTTRAEPGRSDAILRESQRPDPRRKLIIVTRALAPVYAGLTFALALLLMLCGESGLVAVSHAMSIMATSGLSP IGGIQDAQAGLAGEMIMFLFLLFALSRLTFSSDTVAVGHGRLDKDPEFRSGILIILGVPMLLFLRHWLASLEVNASDDWG MALTSLWGAIFTVASFLTTNGFESAYWFSAQEWSGLETPGMILLGLAVMGGGVATTAGGVKLLRVYALYLNGLREMERLV LPSSVSGEGRGNRRLQSNGAFVAWIFFMLFALSLTLISVALSAFGIPFEQAMILAVAGLSTTGPLVEAAGQVPIELNLLD APAKLILCFAMVLGRLETLAIIALLSPNLWRN
Sequences:
>Translated_512_residues MIRRPLKQVRGVLRLPLLLLIWGVFAIAMWIPAVHAVIVDDHQTSQSFFYSGIVGLTLVAFVGLSVSNRVPRYGMPGQLM TLLATFVLLPLYLAIPLQDALKNTSYLNAYFDMVSALTTTGADIFDRPGRVPDSVHLWRVLVAWLGGMFMWIAASAVLAP LSLGGFEVTTRAEPGRSDAILRESQRPDPRRKLIIVTRALAPVYAGLTFALALLLMLCGESGLVAVSHAMSIMATSGLSP IGGIQDAQAGLAGEMIMFLFLLFALSRLTFSSDTVAVGHGRLDKDPEFRSGILIILGVPMLLFLRHWLASLEVNASDDWG MALTSLWGAIFTVASFLTTNGFESAYWFSAQEWSGLETPGMILLGLAVMGGGVATTAGGVKLLRVYALYLNGLREMERLV LPSSVSGEGRGNRRLQSNGAFVAWIFFMLFALSLTLISVALSAFGIPFEQAMILAVAGLSTTGPLVEAAGQVPIELNLLD APAKLILCFAMVLGRLETLAIIALLSPNLWRN >Mature_512_residues MIRRPLKQVRGVLRLPLLLLIWGVFAIAMWIPAVHAVIVDDHQTSQSFFYSGIVGLTLVAFVGLSVSNRVPRYGMPGQLM TLLATFVLLPLYLAIPLQDALKNTSYLNAYFDMVSALTTTGADIFDRPGRVPDSVHLWRVLVAWLGGMFMWIAASAVLAP LSLGGFEVTTRAEPGRSDAILRESQRPDPRRKLIIVTRALAPVYAGLTFALALLLMLCGESGLVAVSHAMSIMATSGLSP IGGIQDAQAGLAGEMIMFLFLLFALSRLTFSSDTVAVGHGRLDKDPEFRSGILIILGVPMLLFLRHWLASLEVNASDDWG MALTSLWGAIFTVASFLTTNGFESAYWFSAQEWSGLETPGMILLGLAVMGGGVATTAGGVKLLRVYALYLNGLREMERLV LPSSVSGEGRGNRRLQSNGAFVAWIFFMLFALSLTLISVALSAFGIPFEQAMILAVAGLSTTGPLVEAAGQVPIELNLLD APAKLILCFAMVLGRLETLAIIALLSPNLWRN
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA. TrkE increases the affinity of the system [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=433, Percent_Identity=26.7898383371824, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI48994987, Length=419, Percent_Identity=29.8329355608592, Blast_Score=106, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 55213; Mature: 55213
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRPLKQVRGVLRLPLLLLIWGVFAIAMWIPAVHAVIVDDHQTSQSFFYSGIVGLTLVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH FVGLSVSNRVPRYGMPGQLMTLLATFVLLPLYLAIPLQDALKNTSYLNAYFDMVSALTTT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHC GADIFDRPGRVPDSVHLWRVLVAWLGGMFMWIAASAVLAPLSLGGFEVTTRAEPGRSDAI CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH LRESQRPDPRRKLIIVTRALAPVYAGLTFALALLLMLCGESGLVAVSHAMSIMATSGLSP HHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC IGGIQDAQAGLAGEMIMFLFLLFALSRLTFSSDTVAVGHGRLDKDPEFRSGILIILGVPM CCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHCCEEHHHHHHH LLFLRHWLASLEVNASDDWGMALTSLWGAIFTVASFLTTNGFESAYWFSAQEWSGLETPG HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCH MILLGLAVMGGGVATTAGGVKLLRVYALYLNGLREMERLVLPSSVSGEGRGNRRLQSNGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC FVAWIFFMLFALSLTLISVALSAFGIPFEQAMILAVAGLSTTGPLVEAAGQVPIELNLLD HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECC APAKLILCFAMVLGRLETLAIIALLSPNLWRN CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIRRPLKQVRGVLRLPLLLLIWGVFAIAMWIPAVHAVIVDDHQTSQSFFYSGIVGLTLVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH FVGLSVSNRVPRYGMPGQLMTLLATFVLLPLYLAIPLQDALKNTSYLNAYFDMVSALTTT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHC GADIFDRPGRVPDSVHLWRVLVAWLGGMFMWIAASAVLAPLSLGGFEVTTRAEPGRSDAI CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH LRESQRPDPRRKLIIVTRALAPVYAGLTFALALLLMLCGESGLVAVSHAMSIMATSGLSP HHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC IGGIQDAQAGLAGEMIMFLFLLFALSRLTFSSDTVAVGHGRLDKDPEFRSGILIILGVPM CCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHCCEEHHHHHHH LLFLRHWLASLEVNASDDWGMALTSLWGAIFTVASFLTTNGFESAYWFSAQEWSGLETPG HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCH MILLGLAVMGGGVATTAGGVKLLRVYALYLNGLREMERLVLPSSVSGEGRGNRRLQSNGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC FVAWIFFMLFALSLTLISVALSAFGIPFEQAMILAVAGLSTTGPLVEAAGQVPIELNLLD HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECC APAKLILCFAMVLGRLETLAIIALLSPNLWRN CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2022616; 9097039; 9278503 [H]