| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081157
Identifier: 99081157
GI number: 99081157
Start: 1403888
End: 1404421
Strand: Reverse
Name: 99081157
Synonym: TM1040_1316
Alternate gene names: NA
Gene position: 1404421-1403888 (Counterclockwise)
Preceding gene: 99081158
Following gene: 99081156
Centisome position: 43.88
GC content: 63.3
Gene sequence:
>534_bases ATGGGTAAGCGCAGCTCCTTCAAACGCCGCAAGAATGATCTGTACCGCACGCCCTGGGGGCCGGTGCCGATATTGGCGCC ACATCTGCCAGCGCAGTTTCGGTTCTCTGAGCCTTGCGCCGGAAACGGTAAACTGATCGACCACCTGCGCCGGATCGGTG GGACGTGCGCCGAGGCGGTCGATATCAATCCCGGGCGCGGCGACGTAGTACAGGGCGACGCCCTGAATTGGCAACCGCTG CAGCGCCCGCAGCGCCCGCTGGATTTCATCATTACCAACCCGCCGTGGTCGCGCGTGATCCTGCACCCGCTGATTGCGCA CTGCATTCAGGTCTGCCCGACGTGGCTGCTGTTCGATGCGGATTGGTCCTACACCCTGCAGGCGCGCCCGTACCTGCGCC ACTGCCGCAAGATCGTATCGGTCGGGCGGGTCAAGTGGATCGAGGGCAGCAAGCACACCGGAAAAGACAACTGCGCCTGG CATCTGTTCACAGCAGAGGACCACGGGCGCACCGAGTTCATAGGGAGGGTCTAA
Upstream 100 bases:
>100_bases AGAGAGCAATGGAGCCTGAAAAGCTTGATCACCGGGGCGCGGGCGGGCGCCAGAGGCGGGCAATCCCGTCACCGTCAGCT ATTCTTAGGAGGTGCCACCC
Downstream 100 bases:
>100_bases CCATGAATCCCAGAGAGCAGGCCTGTGCAGCCGTCAGGCATGCGCAGGAAAGGCGCGACACCCGCGCCCTGGCCAAGGCT GCCGCCGAGGCCTGTCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MGKRSSFKRRKNDLYRTPWGPVPILAPHLPAQFRFSEPCAGNGKLIDHLRRIGGTCAEAVDINPGRGDVVQGDALNWQPL QRPQRPLDFIITNPPWSRVILHPLIAHCIQVCPTWLLFDADWSYTLQARPYLRHCRKIVSVGRVKWIEGSKHTGKDNCAW HLFTAEDHGRTEFIGRV
Sequences:
>Translated_177_residues MGKRSSFKRRKNDLYRTPWGPVPILAPHLPAQFRFSEPCAGNGKLIDHLRRIGGTCAEAVDINPGRGDVVQGDALNWQPL QRPQRPLDFIITNPPWSRVILHPLIAHCIQVCPTWLLFDADWSYTLQARPYLRHCRKIVSVGRVKWIEGSKHTGKDNCAW HLFTAEDHGRTEFIGRV >Mature_176_residues GKRSSFKRRKNDLYRTPWGPVPILAPHLPAQFRFSEPCAGNGKLIDHLRRIGGTCAEAVDINPGRGDVVQGDALNWQPLQ RPQRPLDFIITNPPWSRVILHPLIAHCIQVCPTWLLFDADWSYTLQARPYLRHCRKIVSVGRVKWIEGSKHTGKDNCAWH LFTAEDHGRTEFIGRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20250; Mature: 20118
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRSSFKRRKNDLYRTPWGPVPILAPHLPAQFRFSEPCAGNGKLIDHLRRIGGTCAEAV CCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHE DINPGRGDVVQGDALNWQPLQRPQRPLDFIITNPPWSRVILHPLIAHCIQVCPTWLLFDA ECCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEC DWSYTLQARPYLRHCRKIVSVGRVKWIEGSKHTGKDNCAWHLFTAEDHGRTEFIGRV CCCEEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCCCCHHCCCC >Mature Secondary Structure GKRSSFKRRKNDLYRTPWGPVPILAPHLPAQFRFSEPCAGNGKLIDHLRRIGGTCAEAV CCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHE DINPGRGDVVQGDALNWQPLQRPQRPLDFIITNPPWSRVILHPLIAHCIQVCPTWLLFDA ECCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEC DWSYTLQARPYLRHCRKIVSVGRVKWIEGSKHTGKDNCAWHLFTAEDHGRTEFIGRV CCCEEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA