Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081139

Identifier: 99081139

GI number: 99081139

Start: 1389796

End: 1390053

Strand: Reverse

Name: 99081139

Synonym: TM1040_1298

Alternate gene names: NA

Gene position: 1390053-1389796 (Counterclockwise)

Preceding gene: 99081140

Following gene: 99081138

Centisome position: 43.43

GC content: 59.69

Gene sequence:

>258_bases
GTGGCTGATACCAAGAAACCGCAGAAAAAGATTTTCGCCGTCACCAGTGCTTTTGTCTGGGATAAGGCGATCAAGAAGCC
AGGCGATACCGTCGCGTTGACTGCCGCAGAGGCTCACGGGCTGAAAGAGCGGGGCAAGATCGAAGAACCGCCGGAGAAAC
CTGCCAGCAAGAAAGCTGCTGAGACGGGCGCGAAGAAGGCGGCAGCGACCGACCCGGCCAAAACTGATCCGGCAGCCACG
GCCAAAGCGCCCACCTGA

Upstream 100 bases:

>100_bases
GGCGGGCCTCTGCTTCGGCACTGACGCCAGCTAACCCGAGCACGCATTAAATCTCTGGCCTGATCAGGCCAGAGACACCC
CCTGAAAAAGGATCGAAAAC

Downstream 100 bases:

>100_bases
TGCCAGCGCCGAGCTGGGATAATCCCGACGCCTTCCTGTCGACGGACGACTTTGCCCTTGAGGTAACCGTCACGCCACGG
GGAGGCGTTTCTCGTACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MADTKKPQKKIFAVTSAFVWDKAIKKPGDTVALTAAEAHGLKERGKIEEPPEKPASKKAAETGAKKAAATDPAKTDPAAT
AKAPT

Sequences:

>Translated_85_residues
MADTKKPQKKIFAVTSAFVWDKAIKKPGDTVALTAAEAHGLKERGKIEEPPEKPASKKAAETGAKKAAATDPAKTDPAAT
AKAPT
>Mature_84_residues
ADTKKPQKKIFAVTSAFVWDKAIKKPGDTVALTAAEAHGLKERGKIEEPPEKPASKKAAETGAKKAAATDPAKTDPAATA
KAPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8826; Mature: 8695

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTKKPQKKIFAVTSAFVWDKAIKKPGDTVALTAAEAHGLKERGKIEEPPEKPASKKAA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCHHHHH
ETGAKKAAATDPAKTDPAATAKAPT
HHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADTKKPQKKIFAVTSAFVWDKAIKKPGDTVALTAAEAHGLKERGKIEEPPEKPASKKAA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCHHHHH
ETGAKKAAATDPAKTDPAATAKAPT
HHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA