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The map label for this gene is yicC [C]

Identifier: 99081108

GI number: 99081108

Start: 1364546

End: 1365442

Strand: Reverse

Name: yicC [C]

Synonym: TM1040_1267

Alternate gene names: 99081108

Gene position: 1365442-1364546 (Counterclockwise)

Preceding gene: 99081110

Following gene: 99081107

Centisome position: 42.66

GC content: 58.86

Gene sequence:

>897_bases
ATGGTTTTGCATTCGATGACAGGCTTTGCCTCAGGGCAGGGCGGTGAGGGTGCCTTGGCTTGGATCTGGGACATCAGATC
GGTGAACGCCAAGGGGCTGGATGTGCGTGTGCGCGTGCCTGACTGGCTCGAAGGTCTTGAAAATGAAATTAAAAAACGCG
CAACCAAAAGCCTAGGTCGTGGCAATGTCACGATCGGACTGCGGCTGAGCCGTGCCGACGATGGCAAAGGCGAGCTACAG
ATCAATGCTGCTGCGATGACGGCTGCACTGGCGGCGATCCAGCAGACACAGGCTGCCGCCACCGAAGCGGGCCTGGACCT
CACACCGGTGCGAGCGACGGATATCCTTCAGATACGTGGCGTGCTCGAACAGGTCAGTCACGAAGCCAAAACCGAAGACC
TCGTGACCCAGCTGCTATCCGAATTCGACTCACTTTTGGCCGACTTCATTAACATGCGTTCTAATGAAGGGGCGGCTCTG
GAGGTGGTTTTGAGCGCACAACTTGAACGGATCGAATCCCTGAGCCAGGAGGCCGCCCAGCGCGCCGCAGCGCGCGACCC
CCTCATAAAGGAGGCGCTTCGCGCAAATCTTGCCCGTGTGCTGGACCAAAGCGACGGCGCAGATCCCGACCGCGTGGCGC
AGGAGCTCGCCATGATCGCGGTCAAAGCAGATGTTACCGAAGAACTCGACCGCCTGAAGGCGCATATTGCCGCCGCACGC
AAACTGCTCGGGCAGGGGGGATTGGTGGGGCGAAAGCTCGACTTCCTGATGCAAGAGTTCAACCGGGAGGCCAACACGCT
CTGTTCAAAGGCGCAGAACGCGGCCTTGACCGAAGTGGGTTTGGAACTCAAAACCGTGATCGACCAGATGCGCGAGCAGG
TTCAGAACATAGAATAA

Upstream 100 bases:

>100_bases
CACTTTGGTATAGGTCCGCTCTGCCTATGTGCAAGGCACTATCCGCCGGACCATTGACCCCGGACCCTGCCACTGTATTC
AGGATGCAGGAGGATCACAG

Downstream 100 bases:

>100_bases
GGAGAACTCCCTAACATGGCACATTCAAAAGCGCAGCGACGGGGTCTTCTCATCATCCTGTCCTCCCCCTCCGGTGCAGG
CAAATCCACCCTCGCCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MVLHSMTGFASGQGGEGALAWIWDIRSVNAKGLDVRVRVPDWLEGLENEIKKRATKSLGRGNVTIGLRLSRADDGKGELQ
INAAAMTAALAAIQQTQAAATEAGLDLTPVRATDILQIRGVLEQVSHEAKTEDLVTQLLSEFDSLLADFINMRSNEGAAL
EVVLSAQLERIESLSQEAAQRAAARDPLIKEALRANLARVLDQSDGADPDRVAQELAMIAVKADVTEELDRLKAHIAAAR
KLLGQGGLVGRKLDFLMQEFNREANTLCSKAQNAALTEVGLELKTVIDQMREQVQNIE

Sequences:

>Translated_298_residues
MVLHSMTGFASGQGGEGALAWIWDIRSVNAKGLDVRVRVPDWLEGLENEIKKRATKSLGRGNVTIGLRLSRADDGKGELQ
INAAAMTAALAAIQQTQAAATEAGLDLTPVRATDILQIRGVLEQVSHEAKTEDLVTQLLSEFDSLLADFINMRSNEGAAL
EVVLSAQLERIESLSQEAAQRAAARDPLIKEALRANLARVLDQSDGADPDRVAQELAMIAVKADVTEELDRLKAHIAAAR
KLLGQGGLVGRKLDFLMQEFNREANTLCSKAQNAALTEVGLELKTVIDQMREQVQNIE
>Mature_298_residues
MVLHSMTGFASGQGGEGALAWIWDIRSVNAKGLDVRVRVPDWLEGLENEIKKRATKSLGRGNVTIGLRLSRADDGKGELQ
INAAAMTAALAAIQQTQAAATEAGLDLTPVRATDILQIRGVLEQVSHEAKTEDLVTQLLSEFDSLLADFINMRSNEGAAL
EVVLSAQLERIESLSQEAAQRAAARDPLIKEALRANLARVLDQSDGADPDRVAQELAMIAVKADVTEELDRLKAHIAAAR
KLLGQGGLVGRKLDFLMQEFNREANTLCSKAQNAALTEVGLELKTVIDQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=299, Percent_Identity=36.1204013377926, Blast_Score=157, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32238; Mature: 32238

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLHSMTGFASGQGGEGALAWIWDIRSVNAKGLDVRVRVPDWLEGLENEIKKRATKSLGR
CCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC
GNVTIGLRLSRADDGKGELQINAAAMTAALAAIQQTQAAATEAGLDLTPVRATDILQIRG
CCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VLEQVSHEAKTEDLVTQLLSEFDSLLADFINMRSNEGAALEVVLSAQLERIESLSQEAAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAAARDPLIKEALRANLARVLDQSDGADPDRVAQELAMIAVKADVTEELDRLKAHIAAAR
HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLGQGGLVGRKLDFLMQEFNREANTLCSKAQNAALTEVGLELKTVIDQMREQVQNIE
HHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLHSMTGFASGQGGEGALAWIWDIRSVNAKGLDVRVRVPDWLEGLENEIKKRATKSLGR
CCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC
GNVTIGLRLSRADDGKGELQINAAAMTAALAAIQQTQAAATEAGLDLTPVRATDILQIRG
CCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VLEQVSHEAKTEDLVTQLLSEFDSLLADFINMRSNEGAALEVVLSAQLERIESLSQEAAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAAARDPLIKEALRANLARVLDQSDGADPDRVAQELAMIAVKADVTEELDRLKAHIAAAR
HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLGQGGLVGRKLDFLMQEFNREANTLCSKAQNAALTEVGLELKTVIDQMREQVQNIE
HHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]