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The map label for this gene is nagD [C]

Identifier: 99080695

GI number: 99080695

Start: 906573

End: 907493

Strand: Direct

Name: nagD [C]

Synonym: TM1040_0854

Alternate gene names: 99080695

Gene position: 906573-907493 (Clockwise)

Preceding gene: 99080694

Following gene: 99080696

Centisome position: 28.32

GC content: 62.32

Gene sequence:

>921_bases
ATGGCAGGCCAAAGTACAGATATCGGCACTGACTGGGCGTTTCAGCGCTATGAGAGCGTGCGTGCAACCCTGCCCGAGGC
CAGTTTTGCGGCGGCCTCACGGCGGGGAGGAGATCTTGGCGACACCGTCGGAGATTTTGACGCCTATATCCTCGATGCCT
TTGGGGTTTTGAACCGGGGCGAGACCGCAATTGCGGGCGCGGTGGAGCGCATGGCAGCACTCAGGGCGCTTGGTAAAAGG
CTGGTGGTGCTGACCAATGCGGCAAGCTACACGCGCGCAGAGGTGCTGGCGAAATATCACCGGCTTGGCTTTGACTTCGA
CGCGTCAGAAGTGGTCTCAAGCCGCGATGTGGCCTTTGCCGGTCTGCCCGCACTCCCGGCCGGCGCATTTTGGGCCGCCG
CTGCCGCAGCAGGTGATGATTTCAGTGATGCCCCCAGCGGCGCTGAAATCGCGCATCTGGCAGAGCGGCCGGAGCTCTTG
CAAAGCGCGGGTGGCTTTCTGCTGCTGTCCTCTGCACGCTGGAGCGCGGCCGAAACAGACGCGCTCACCGAGGCATTGTT
GGCGTCTCCGCGTCCTCTGGTGGTCGCAAACCCCGATCTCGTCGCCCCGCGCGAGGATGGCCTTTCGATGGAGCCGGGCC
TGATCGCGCAGGAGCTGACCGAGCGCACCGGTCAGCCTGCAGCGTTTTTTGGCAAACCCTTTGGCAACGCCTTTGACGCG
GCACTCGCGCGGCTCTCTGGCATTGAGCGCACGCGTATTGCAATGGTCGGCGATACGCTGCACACGGATGTTCTGGGAGG
CGCGGCTGCAGGGATCGGCTCCATCCTGATCACCGATCACGGCCTTTTTAAGGGCCATGATGTCGCGCCATACATCGAAA
AGAGCGCAATTCGACCGAGTTGGATCGTCTCGACAACATAA

Upstream 100 bases:

>100_bases
CATCGTGACCGATTATCCGGGCCGTGTGCAGCGCCTGCTGCTCGAGCGCGGCCTTGGTTGGAGCGCGCGAGTGTCGACCC
CGCCGGTCGCGGTCTGATCC

Downstream 100 bases:

>100_bases
ACTCGTCGAAAAATACGTTGGGCTGTGACCCAACCCAGAACGAGGACGGAAGACAGGATTGACGGCATTTTTGATTCAGA
TCGCGGGCGCTGCGGCGCTA

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAGQSTDIGTDWAFQRYESVRATLPEASFAAASRRGGDLGDTVGDFDAYILDAFGVLNRGETAIAGAVERMAALRALGKR
LVVLTNAASYTRAEVLAKYHRLGFDFDASEVVSSRDVAFAGLPALPAGAFWAAAAAAGDDFSDAPSGAEIAHLAERPELL
QSAGGFLLLSSARWSAAETDALTEALLASPRPLVVANPDLVAPREDGLSMEPGLIAQELTERTGQPAAFFGKPFGNAFDA
ALARLSGIERTRIAMVGDTLHTDVLGGAAAGIGSILITDHGLFKGHDVAPYIEKSAIRPSWIVSTT

Sequences:

>Translated_306_residues
MAGQSTDIGTDWAFQRYESVRATLPEASFAAASRRGGDLGDTVGDFDAYILDAFGVLNRGETAIAGAVERMAALRALGKR
LVVLTNAASYTRAEVLAKYHRLGFDFDASEVVSSRDVAFAGLPALPAGAFWAAAAAAGDDFSDAPSGAEIAHLAERPELL
QSAGGFLLLSSARWSAAETDALTEALLASPRPLVVANPDLVAPREDGLSMEPGLIAQELTERTGQPAAFFGKPFGNAFDA
ALARLSGIERTRIAMVGDTLHTDVLGGAAAGIGSILITDHGLFKGHDVAPYIEKSAIRPSWIVSTT
>Mature_305_residues
AGQSTDIGTDWAFQRYESVRATLPEASFAAASRRGGDLGDTVGDFDAYILDAFGVLNRGETAIAGAVERMAALRALGKRL
VVLTNAASYTRAEVLAKYHRLGFDFDASEVVSSRDVAFAGLPALPAGAFWAAAAAAGDDFSDAPSGAEIAHLAERPELLQ
SAGGFLLLSSARWSAAETDALTEALLASPRPLVVANPDLVAPREDGLSMEPGLIAQELTERTGQPAAFFGKPFGNAFDAA
LARLSGIERTRIAMVGDTLHTDVLGGAAAGIGSILITDHGLFKGHDVAPYIEKSAIRPSWIVSTT

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI108796653, Length=294, Percent_Identity=31.6326530612245, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 31918; Mature: 31787

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQSTDIGTDWAFQRYESVRATLPEASFAAASRRGGDLGDTVGDFDAYILDAFGVLNRG
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
ETAIAGAVERMAALRALGKRLVVLTNAASYTRAEVLAKYHRLGFDFDASEVVSSRDVAFA
CHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEE
GLPALPAGAFWAAAAAAGDDFSDAPSGAEIAHLAERPELLQSAGGFLLLSSARWSAAETD
CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
ALTEALLASPRPLVVANPDLVAPREDGLSMEPGLIAQELTERTGQPAAFFGKPFGNAFDA
HHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHH
ALARLSGIERTRIAMVGDTLHTDVLGGAAAGIGSILITDHGLFKGHDVAPYIEKSAIRPS
HHHHHHCCCHHEEEEECCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHCCCCC
WIVSTT
EEEECC
>Mature Secondary Structure 
AGQSTDIGTDWAFQRYESVRATLPEASFAAASRRGGDLGDTVGDFDAYILDAFGVLNRG
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
ETAIAGAVERMAALRALGKRLVVLTNAASYTRAEVLAKYHRLGFDFDASEVVSSRDVAFA
CHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEE
GLPALPAGAFWAAAAAAGDDFSDAPSGAEIAHLAERPELLQSAGGFLLLSSARWSAAETD
CCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
ALTEALLASPRPLVVANPDLVAPREDGLSMEPGLIAQELTERTGQPAAFFGKPFGNAFDA
HHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHH
ALARLSGIERTRIAMVGDTLHTDVLGGAAAGIGSILITDHGLFKGHDVAPYIEKSAIRPS
HHHHHHCCCHHEEEEECCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHCCCCC
WIVSTT
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]