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The map label for this gene is 99080683

Identifier: 99080683

GI number: 99080683

Start: 888359

End: 889966

Strand: Direct

Name: 99080683

Synonym: TM1040_0842

Alternate gene names: NA

Gene position: 888359-889966 (Clockwise)

Preceding gene: 99080682

Following gene: 99080684

Centisome position: 27.75

GC content: 62.31

Gene sequence:

>1608_bases
GTGCCAAAGTCCGCACCGCTTGCGCGGGGCGATTATCTGAGCGCCCCACCTCAGCTGTCGCTCAAACGATTTGTACCCCC
GGTGGGCGATCAGGGCCAGCAGGGCAGCTGTGTGGGCTGGGCCACCGCTTATGCGGCGCGCACCTTGCTCAAGGCCAAGG
ATCTCGAGGTTGAGAACACTGATCGGCTGCGCGACCTGGTGCTGTCGCCGTCTTATGTGTTCAACCAGATCCACCAGCCT
GGCTGCAACGGGTCTTATGTCGCAGAGGCGTTGACGCTGATGCAGCGGCAGGGCGTGTCGCTCTTGCGCGACTTTCCCTA
TGATCAATATTCCTGCACGGCACAGCCTTCGGCGAGCCTGCGCGACAAAGCGAGCCAGTTCCGGATCAAAGGCTATTCAC
GCCTCTGGGGGGGCTATGGCCGCAACAAGCACGTCGCAACCCGGCGCGCGCTGGCCAATGGCAATCCGGTTGTGATCGTC
ATGGGGGTGGGCGACGGGTTCATGCGCCACAGCGGCAGTGGCATCTGGGAGCCAACCTCTACTGAATGGAGTGAGCTGCG
CAGCAACACGCTGGGGGCGCATGCGATGACCGTGGTGGGGTATGATGACACCCGCGGTGGCGGCGCTTTCGAAGTGGTCA
ATTCCTGGAGTGCGGGATGGGGCAACCGCGGCTATTTCTGGATTTCATACGAGGATTTCAACGCTTTCGTCTATGAGGGC
TATGAGGTGCTGCCGCCCGATCCACCTCCGCCGCCTCGGGTGGTCGATATGGCGGGCAGCGCACGGGTGCTGCATCTCTC
GGGCAATGAGCTGGACGTGACGCGCAGCGAAGGCGGTTACAAAATCCGCAAACCCCTGCCATCGGGCACGCGCTTTCGGG
TCGAGGCCTCAAGCAAATTCAACGGCGCACTATATGTGATCGGGGGCGATTCCAGCGGCGACTATGTGAGCCTGTTTCCC
CGCGGCGACCGGGTGACGCCCTATACCCATGGCGGAACCACGATGCTGTTGCCGGGGCCGACAGAGCAGCATTTCACCCG
GCTCAATGACACGGTTGGAACCGATTACTATGTCTTGCTTTACGCGCAGGAGCCGCTCGATCCGGAAACCATTGCGATGC
GTATGGCGCGCGGATCCGGCAGCGTGGAGGCACGGCTGCGCAGTGCGCTTGGCAACCGTCTCGTGCCACAAGATGAGATG
GAGTTGCTCGCGTCAGGCATCGGTTTCGAAGCCGCAAGTGGAGAGGCGGATGTGGCGGCTCTGGTCCTGAGCATCGACCA
CATTGCCCCGGATCCCGCGCAAGCCGATCGCGAGGCGCCACTGATTGTGCTCACCAACCCGGCGCCCGAGGCCTTTGACA
GCGCGGATGCGGTGATCCCCGTGCAAAGCCGTCTTTTCCGCCTCGAGGGCATGGCGCAGGATGAAAGCGAGATTGCTTCG
CTGCGTGTCAACGGATCTCTGAGCAGCCGCTATTCCTCGCGCGGACCGTTTCGCGCCGAGATCGAGCTCCCCGAAGGGCC
CGGTCCCCATTCCATCGAAATTGAAACACGCGACGCAGCGGGCAATGCCGCGCGCCGGAGTTTTCAATTCAGCCTGACTT
TCAACTGA

Upstream 100 bases:

>100_bases
TGGGCTCATGTCTTTGGGTCTATCCGCGCTGGCCCCATCGAAAGCGCAGGCACAGACCTATAGTCTGGGTGCTGTCGCCG
ATCCAGAGGTCTATGCGGCG

Downstream 100 bases:

>100_bases
TCCTTACAGGAGACGTTCCGTGATCCGAACTGCCCTATTCCGAGCCATACTTTTGCTGACCTTACCCCTATCGTGGGGGG
GCTCCGTGCAGGCGCTGGAG

Product: peptidase C1A, papain

Products: NA

Alternate protein names: Cysteine Protease; Fibronectin Type III Domain Protein; Cysteine Protease-Like Protein; Papain Family Cysteine Protease

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MPKSAPLARGDYLSAPPQLSLKRFVPPVGDQGQQGSCVGWATAYAARTLLKAKDLEVENTDRLRDLVLSPSYVFNQIHQP
GCNGSYVAEALTLMQRQGVSLLRDFPYDQYSCTAQPSASLRDKASQFRIKGYSRLWGGYGRNKHVATRRALANGNPVVIV
MGVGDGFMRHSGSGIWEPTSTEWSELRSNTLGAHAMTVVGYDDTRGGGAFEVVNSWSAGWGNRGYFWISYEDFNAFVYEG
YEVLPPDPPPPPRVVDMAGSARVLHLSGNELDVTRSEGGYKIRKPLPSGTRFRVEASSKFNGALYVIGGDSSGDYVSLFP
RGDRVTPYTHGGTTMLLPGPTEQHFTRLNDTVGTDYYVLLYAQEPLDPETIAMRMARGSGSVEARLRSALGNRLVPQDEM
ELLASGIGFEAASGEADVAALVLSIDHIAPDPAQADREAPLIVLTNPAPEAFDSADAVIPVQSRLFRLEGMAQDESEIAS
LRVNGSLSSRYSSRGPFRAEIELPEGPGPHSIEIETRDAAGNAARRSFQFSLTFN

Sequences:

>Translated_535_residues
MPKSAPLARGDYLSAPPQLSLKRFVPPVGDQGQQGSCVGWATAYAARTLLKAKDLEVENTDRLRDLVLSPSYVFNQIHQP
GCNGSYVAEALTLMQRQGVSLLRDFPYDQYSCTAQPSASLRDKASQFRIKGYSRLWGGYGRNKHVATRRALANGNPVVIV
MGVGDGFMRHSGSGIWEPTSTEWSELRSNTLGAHAMTVVGYDDTRGGGAFEVVNSWSAGWGNRGYFWISYEDFNAFVYEG
YEVLPPDPPPPPRVVDMAGSARVLHLSGNELDVTRSEGGYKIRKPLPSGTRFRVEASSKFNGALYVIGGDSSGDYVSLFP
RGDRVTPYTHGGTTMLLPGPTEQHFTRLNDTVGTDYYVLLYAQEPLDPETIAMRMARGSGSVEARLRSALGNRLVPQDEM
ELLASGIGFEAASGEADVAALVLSIDHIAPDPAQADREAPLIVLTNPAPEAFDSADAVIPVQSRLFRLEGMAQDESEIAS
LRVNGSLSSRYSSRGPFRAEIELPEGPGPHSIEIETRDAAGNAARRSFQFSLTFN
>Mature_534_residues
PKSAPLARGDYLSAPPQLSLKRFVPPVGDQGQQGSCVGWATAYAARTLLKAKDLEVENTDRLRDLVLSPSYVFNQIHQPG
CNGSYVAEALTLMQRQGVSLLRDFPYDQYSCTAQPSASLRDKASQFRIKGYSRLWGGYGRNKHVATRRALANGNPVVIVM
GVGDGFMRHSGSGIWEPTSTEWSELRSNTLGAHAMTVVGYDDTRGGGAFEVVNSWSAGWGNRGYFWISYEDFNAFVYEGY
EVLPPDPPPPPRVVDMAGSARVLHLSGNELDVTRSEGGYKIRKPLPSGTRFRVEASSKFNGALYVIGGDSSGDYVSLFPR
GDRVTPYTHGGTTMLLPGPTEQHFTRLNDTVGTDYYVLLYAQEPLDPETIAMRMARGSGSVEARLRSALGNRLVPQDEME
LLASGIGFEAASGEADVAALVLSIDHIAPDPAQADREAPLIVLTNPAPEAFDSADAVIPVQSRLFRLEGMAQDESEIASL
RVNGSLSSRYSSRGPFRAEIELPEGPGPHSIEIETRDAAGNAARRSFQFSLTFN

Specific function: Unknown

COG id: COG4870

COG function: function code O; Cysteine protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503151, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17569349, Length=204, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58137; Mature: 58005

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSAPLARGDYLSAPPQLSLKRFVPPVGDQGQQGSCVGWATAYAARTLLKAKDLEVENT
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCH
DRLRDLVLSPSYVFNQIHQPGCNGSYVAEALTLMQRQGVSLLRDFPYDQYSCTAQPSASL
HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCHH
RDKASQFRIKGYSRLWGGYGRNKHVATRRALANGNPVVIVMGVGDGFMRHSGSGIWEPTS
HHHHHHEEECCHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCCCCCC
TEWSELRSNTLGAHAMTVVGYDDTRGGGAFEVVNSWSAGWGNRGYFWISYEDFNAFVYEG
CHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEEEECC
YEVLPPDPPPPPRVVDMAGSARVLHLSGNELDVTRSEGGYKIRKPLPSGTRFRVEASSKF
EEECCCCCCCCCCEEECCCCEEEEEECCCEEEEEECCCCEEEECCCCCCCEEEEEECCCC
NGALYVIGGDSSGDYVSLFPRGDRVTPYTHGGTTMLLPGPTEQHFTRLNDTVGTDYYVLL
CCEEEEEECCCCCCEEEEECCCCCCCEEECCCEEEEECCCCHHHHHHHHCCCCCCEEEEE
YAQEPLDPETIAMRMARGSGSVEARLRSALGNRLVPQDEMELLASGIGFEAASGEADVAA
EECCCCCHHHHHEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEE
LVLSIDHIAPDPAQADREAPLIVLTNPAPEAFDSADAVIPVQSRLFRLEGMAQDESEIAS
EEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEE
LRVNGSLSSRYSSRGPFRAEIELPEGPGPHSIEIETRDAAGNAARRSFQFSLTFN
EEECCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
PKSAPLARGDYLSAPPQLSLKRFVPPVGDQGQQGSCVGWATAYAARTLLKAKDLEVENT
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCH
DRLRDLVLSPSYVFNQIHQPGCNGSYVAEALTLMQRQGVSLLRDFPYDQYSCTAQPSASL
HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCCCHH
RDKASQFRIKGYSRLWGGYGRNKHVATRRALANGNPVVIVMGVGDGFMRHSGSGIWEPTS
HHHHHHEEECCHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCCCCCC
TEWSELRSNTLGAHAMTVVGYDDTRGGGAFEVVNSWSAGWGNRGYFWISYEDFNAFVYEG
CHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEEEECC
YEVLPPDPPPPPRVVDMAGSARVLHLSGNELDVTRSEGGYKIRKPLPSGTRFRVEASSKF
EEECCCCCCCCCCEEECCCCEEEEEECCCEEEEEECCCCEEEECCCCCCCEEEEEECCCC
NGALYVIGGDSSGDYVSLFPRGDRVTPYTHGGTTMLLPGPTEQHFTRLNDTVGTDYYVLL
CCEEEEEECCCCCCEEEEECCCCCCCEEECCCEEEEECCCCHHHHHHHHCCCCCCEEEEE
YAQEPLDPETIAMRMARGSGSVEARLRSALGNRLVPQDEMELLASGIGFEAASGEADVAA
EECCCCCHHHHHEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEE
LVLSIDHIAPDPAQADREAPLIVLTNPAPEAFDSADAVIPVQSRLFRLEGMAQDESEIAS
EEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEE
LRVNGSLSSRYSSRGPFRAEIELPEGPGPHSIEIETRDAAGNAARRSFQFSLTFN
EEECCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA