Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080682

Identifier: 99080682

GI number: 99080682

Start: 887959

End: 888321

Strand: Direct

Name: 99080682

Synonym: TM1040_0841

Alternate gene names: NA

Gene position: 887959-888321 (Clockwise)

Preceding gene: 99080680

Following gene: 99080683

Centisome position: 27.74

GC content: 56.75

Gene sequence:

>363_bases
ATGGTTTATGGCGATTGTCGATCGGGGTGCATCCAAAGCGGCCGGGTAGAATATACAGTCCGGCGCTTGCCTGTCGTTTC
AGGGTGCAAGCGCCATTTTGGTTTCATCCATCACGTTTTTGCTCCCCAGCACCTGTTCTACTCATCCCTTTCTCGCACGC
TGGGCTACGTCGCCTATGGCGGTCTGAGCCCGAGACGCTCAATTTGGAAGGCAAATTTTGGTTTCTTCTTCGACGATCCG
GGGCCTTGGTCGTACCGCGCAATCTGCGGCGGTTTGTCTGTCGCTTGGCCTGGCCACCTGTGGGCTCATGTCTTTGGGTC
TATCCGCGCTGGCCCCATCGAAAGCGCAGGCACAGACCTATAG

Upstream 100 bases:

>100_bases
ATCTTCGGCCAGGTGAGGCAAGGCGTGCAAATTCTTGACCTGACGTAACAGAGCCGTAAGGATAGAAAGCTGGGACGACG
CAAAGATACACAAACGGGGG

Downstream 100 bases:

>100_bases
TCTGGGTGCTGTCGCCGATCCAGAGGTCTATGCGGCGGTGCCAAAGTCCGCACCGCTTGCGCGGGGCGATTATCTGAGCG
CCCCACCTCAGCTGTCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYGGLSPRRSIWKANFGFFFDDP
GPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL

Sequences:

>Translated_120_residues
MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYGGLSPRRSIWKANFGFFFDDP
GPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL
>Mature_120_residues
MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYGGLSPRRSIWKANFGFFFDDP
GPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13326; Mature: 13326

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYG
CCCCCCCCHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
GLSPRRSIWKANFGFFFDDPGPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL
CCCCCHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYG
CCCCCCCCHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
GLSPRRSIWKANFGFFFDDPGPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL
CCCCCHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA