| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080682
Identifier: 99080682
GI number: 99080682
Start: 887959
End: 888321
Strand: Direct
Name: 99080682
Synonym: TM1040_0841
Alternate gene names: NA
Gene position: 887959-888321 (Clockwise)
Preceding gene: 99080680
Following gene: 99080683
Centisome position: 27.74
GC content: 56.75
Gene sequence:
>363_bases ATGGTTTATGGCGATTGTCGATCGGGGTGCATCCAAAGCGGCCGGGTAGAATATACAGTCCGGCGCTTGCCTGTCGTTTC AGGGTGCAAGCGCCATTTTGGTTTCATCCATCACGTTTTTGCTCCCCAGCACCTGTTCTACTCATCCCTTTCTCGCACGC TGGGCTACGTCGCCTATGGCGGTCTGAGCCCGAGACGCTCAATTTGGAAGGCAAATTTTGGTTTCTTCTTCGACGATCCG GGGCCTTGGTCGTACCGCGCAATCTGCGGCGGTTTGTCTGTCGCTTGGCCTGGCCACCTGTGGGCTCATGTCTTTGGGTC TATCCGCGCTGGCCCCATCGAAAGCGCAGGCACAGACCTATAG
Upstream 100 bases:
>100_bases ATCTTCGGCCAGGTGAGGCAAGGCGTGCAAATTCTTGACCTGACGTAACAGAGCCGTAAGGATAGAAAGCTGGGACGACG CAAAGATACACAAACGGGGG
Downstream 100 bases:
>100_bases TCTGGGTGCTGTCGCCGATCCAGAGGTCTATGCGGCGGTGCCAAAGTCCGCACCGCTTGCGCGGGGCGATTATCTGAGCG CCCCACCTCAGCTGTCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYGGLSPRRSIWKANFGFFFDDP GPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL
Sequences:
>Translated_120_residues MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYGGLSPRRSIWKANFGFFFDDP GPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL >Mature_120_residues MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYGGLSPRRSIWKANFGFFFDDP GPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13326; Mature: 13326
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYG CCCCCCCCHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC GLSPRRSIWKANFGFFFDDPGPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL CCCCCHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVYGDCRSGCIQSGRVEYTVRRLPVVSGCKRHFGFIHHVFAPQHLFYSSLSRTLGYVAYG CCCCCCCCHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC GLSPRRSIWKANFGFFFDDPGPWSYRAICGGLSVAWPGHLWAHVFGSIRAGPIESAGTDL CCCCCHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA