| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080664
Identifier: 99080664
GI number: 99080664
Start: 866908
End: 867261
Strand: Direct
Name: 99080664
Synonym: TM1040_0823
Alternate gene names: NA
Gene position: 866908-867261 (Clockwise)
Preceding gene: 99080663
Following gene: 99080665
Centisome position: 27.08
GC content: 62.99
Gene sequence:
>354_bases ATGAGCAGACAGACGGGCTCTTCGTCTAACTGGTACATCCGCCGCGGGGACGGATACCTAACCACATCTGAAATCGCATG GGAGATCGGGGCCAAGGGCTCCGGTCTCTTTCTCTACGTGCCTCCGGGCTTTGCCTTTGACGTCTCGATTCCTCGCTGGG CCGGGTGGATCTTCGACCGGCACGATCCCCGCTATCTCAAAGCCGCCGCGCTGCATGATTACGCCCTCCACCGGCTCGGC TGGGGGCGGGTCAGCGCGGCTGCACCCTTTTCCGAAGCGCTGCGCGCCGCTGGCGTCTCGCGCATCCGCAGGCTGGCAAT GGTTCTGGCCGTCACTATCCACAAATGGAGATGA
Upstream 100 bases:
>100_bases GCTGAGCAACTGCCTGCGAGGGTCGAGGCCCTGACGGCGCTGAACGTGCAGCGCATGCACCCCCTTGTGCTGATGCTGCA AGCGTCTCTCGGCTTGACCG
Downstream 100 bases:
>100_bases GCAACCGTGAAAGACCTGCTGTTTGCGATTGAATTCTGGCTGGCTATGGCGGCGGCAATCCTGCTGAAGCTGCGCGCCTC GCCCCAAATCACCCTTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSRQTGSSSNWYIRRGDGYLTTSEIAWEIGAKGSGLFLYVPPGFAFDVSIPRWAGWIFDRHDPRYLKAAALHDYALHRLG WGRVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR
Sequences:
>Translated_117_residues MSRQTGSSSNWYIRRGDGYLTTSEIAWEIGAKGSGLFLYVPPGFAFDVSIPRWAGWIFDRHDPRYLKAAALHDYALHRLG WGRVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR >Mature_116_residues SRQTGSSSNWYIRRGDGYLTTSEIAWEIGAKGSGLFLYVPPGFAFDVSIPRWAGWIFDRHDPRYLKAAALHDYALHRLGW GRVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13162; Mature: 13031
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQTGSSSNWYIRRGDGYLTTSEIAWEIGAKGSGLFLYVPPGFAFDVSIPRWAGWIFDR CCCCCCCCCCEEEECCCCEEEHHHEEEEECCCCCCEEEEECCCCEEECCCCCHHCEEECC HDPRYLKAAALHDYALHRLGWGRVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRQTGSSSNWYIRRGDGYLTTSEIAWEIGAKGSGLFLYVPPGFAFDVSIPRWAGWIFDR CCCCCCCCCEEEECCCCEEEHHHEEEEECCCCCCEEEEECCCCEEECCCCCHHCEEECC HDPRYLKAAALHDYALHRLGWGRVSAAAPFSEALRAAGVSRIRRLAMVLAVTIHKWR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA