Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080663

Identifier: 99080663

GI number: 99080663

Start: 866391

End: 866936

Strand: Direct

Name: 99080663

Synonym: TM1040_0822

Alternate gene names: NA

Gene position: 866391-866936 (Clockwise)

Preceding gene: 99080662

Following gene: 99080664

Centisome position: 27.07

GC content: 59.34

Gene sequence:

>546_bases
ATGACTTATGCTTTGGTGAGAGACGGAATTTTAACCCGCTATCCCTACTCCCTCGAAGACCTTCGTCGCGACAACCCTCG
CTTGAGTCTGCCGCCCACTCTCCCCGGCTTCAAGCTGGCAGAGTACGGCATGTTCCCAGTCTTGATCGCAGAGCGACCCA
CTCTGGAAACTGATGAGGTAGCAGTTCTGTCGGAAATTCCTGAGCTTGTAGAAGGGCAGTGGGTTCTTGGCTGGACGGTG
CGGGCAAAGACACCCGAAGAGGTCGCAGCCGAACGTGATGCAATGTCTGTTCCGCGCGGTCAGTTTGCTGTCGCTGCAGC
CGGGGCAGGGCTCGTGACTGAGCAGGAGGCCTTGAATTGGGCAGGCGGGAACAGCCTTCCTGCTACCGTCAACGCAGTGA
TCGACGCCTTGCCCCAAGCTGAGCAACTGCCTGCGAGGGTCGAGGCCCTGACGGCGCTGAACGTGCAGCGCATGCACCCC
CTTGTGCTGATGCTGCAAGCGTCTCTCGGCTTGACCGATGAGCAGACAGACGGGCTCTTCGTCTAA

Upstream 100 bases:

>100_bases
CTCCAACAGTTGCGTCAGATGGTGAAACGGACCTGATATACTTTACCACGCGCGATGGGGGCACCACGTTCTACGGCACG
AAACGAGGAGACGCGTACTC

Downstream 100 bases:

>100_bases
CTGGTACATCCGCCGCGGGGACGGATACCTAACCACATCTGAAATCGCATGGGAGATCGGGGCCAAGGGCTCCGGTCTCT
TTCTCTACGTGCCTCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTYALVRDGILTRYPYSLEDLRRDNPRLSLPPTLPGFKLAEYGMFPVLIAERPTLETDEVAVLSEIPELVEGQWVLGWTV
RAKTPEEVAAERDAMSVPRGQFAVAAAGAGLVTEQEALNWAGGNSLPATVNAVIDALPQAEQLPARVEALTALNVQRMHP
LVLMLQASLGLTDEQTDGLFV

Sequences:

>Translated_181_residues
MTYALVRDGILTRYPYSLEDLRRDNPRLSLPPTLPGFKLAEYGMFPVLIAERPTLETDEVAVLSEIPELVEGQWVLGWTV
RAKTPEEVAAERDAMSVPRGQFAVAAAGAGLVTEQEALNWAGGNSLPATVNAVIDALPQAEQLPARVEALTALNVQRMHP
LVLMLQASLGLTDEQTDGLFV
>Mature_180_residues
TYALVRDGILTRYPYSLEDLRRDNPRLSLPPTLPGFKLAEYGMFPVLIAERPTLETDEVAVLSEIPELVEGQWVLGWTVR
AKTPEEVAAERDAMSVPRGQFAVAAAGAGLVTEQEALNWAGGNSLPATVNAVIDALPQAEQLPARVEALTALNVQRMHPL
VLMLQASLGLTDEQTDGLFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19663; Mature: 19532

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYALVRDGILTRYPYSLEDLRRDNPRLSLPPTLPGFKLAEYGMFPVLIAERPTLETDEV
CCEEEECCCCHHCCCCCHHHHHCCCCCEECCCCCCCCCHHHCCCCEEEEECCCCCCCHHH
AVLSEIPELVEGQWVLGWTVRAKTPEEVAAERDAMSVPRGQFAVAAAGAGLVTEQEALNW
HHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHCC
AGGNSLPATVNAVIDALPQAEQLPARVEALTALNVQRMHPLVLMLQASLGLTDEQTDGLF
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCC
V
C
>Mature Secondary Structure 
TYALVRDGILTRYPYSLEDLRRDNPRLSLPPTLPGFKLAEYGMFPVLIAERPTLETDEV
CEEEECCCCHHCCCCCHHHHHCCCCCEECCCCCCCCCHHHCCCCEEEEECCCCCCCHHH
AVLSEIPELVEGQWVLGWTVRAKTPEEVAAERDAMSVPRGQFAVAAAGAGLVTEQEALNW
HHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHCC
AGGNSLPATVNAVIDALPQAEQLPARVEALTALNVQRMHPLVLMLQASLGLTDEQTDGLF
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA