Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080645

Identifier: 99080645

GI number: 99080645

Start: 852235

End: 852918

Strand: Direct

Name: 99080645

Synonym: TM1040_0804

Alternate gene names: NA

Gene position: 852235-852918 (Clockwise)

Preceding gene: 99080644

Following gene: 99080646

Centisome position: 26.62

GC content: 62.72

Gene sequence:

>684_bases
ATGAAAATCGAACTGACCGACCTCTCGGGGCTTCCCGAGGGGCTGAAATCCGTTGTCGAGTCCGAGGGCGACAAGCACAC
GCTGGACCTGTCTAAGCTGATGCCCTCCGAGGATTTGACGGGCCTGAAGTCGGCCCTCCAGAAAGAGCGTGAGAACGCCC
GCGCCTGGGAGAAGTTTGGCAAGCCCGATGAGCTGGAAGCCAAGCTGTCCGAGCTGGAAAAGAAGGCGCAAGGCACCGGC
AAGGCCGCCGAGGACGCGCAGGCCAAGCTGGACGCACTCAAGGCCGAGTATGACGGCAAGCTGTCAGACAAAGACAAGCG
CATCGAAATCATGATGAAGGCCAACGCCTCGGAATCTCTCAAGGCGGAGCTGGCGAAGGCGGGCTTCATCCCCGAAGCAA
TTGACGACATTGCGGCCACAGCACTTGGCCGCCTGGAGTTCGGCGACGACGGCACCCCGAAGGTGCTTACCGCTGACGGC
AAGCCCATGATCGGCAACGGCGCGGACCACGGCGCCACCCTGTCCGACCTGGCGAAAGAACTGGCCGACGCGAAACCCTA
TGCGGTGCGCGACGGAGGAAAAGGCGGCGGCGGGAAGCAGCCGGGATCGCAGAGCGGGACGCCTGCACACAGCAACCCCA
TCTTGGCGCAGGTTCCGGGTTTGGCCGACCTGCCTGAAAAATAA

Upstream 100 bases:

>100_bases
AGGGCAAGGCCACGGGCTTTGCCTGCGTCTATTGCCAGAAGCGAGTCTGGCCTTAACAGCGGGCGGGATGCTCGCGCCAA
CCTAGCGGGAAGCTAATCAC

Downstream 100 bases:

>100_bases
AGGAGAACAGCAATGTCGCTGTCCAATATGCAGGTATTCAACGACTACATCATGCCTGCGACCATCAAGTCGCTCGATCA
GATGATCGACAAATTCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKIELTDLSGLPEGLKSVVESEGDKHTLDLSKLMPSEDLTGLKSALQKERENARAWEKFGKPDELEAKLSELEKKAQGTG
KAAEDAQAKLDALKAEYDGKLSDKDKRIEIMMKANASESLKAELAKAGFIPEAIDDIAATALGRLEFGDDGTPKVLTADG
KPMIGNGADHGATLSDLAKELADAKPYAVRDGGKGGGGKQPGSQSGTPAHSNPILAQVPGLADLPEK

Sequences:

>Translated_227_residues
MKIELTDLSGLPEGLKSVVESEGDKHTLDLSKLMPSEDLTGLKSALQKERENARAWEKFGKPDELEAKLSELEKKAQGTG
KAAEDAQAKLDALKAEYDGKLSDKDKRIEIMMKANASESLKAELAKAGFIPEAIDDIAATALGRLEFGDDGTPKVLTADG
KPMIGNGADHGATLSDLAKELADAKPYAVRDGGKGGGGKQPGSQSGTPAHSNPILAQVPGLADLPEK
>Mature_227_residues
MKIELTDLSGLPEGLKSVVESEGDKHTLDLSKLMPSEDLTGLKSALQKERENARAWEKFGKPDELEAKLSELEKKAQGTG
KAAEDAQAKLDALKAEYDGKLSDKDKRIEIMMKANASESLKAELAKAGFIPEAIDDIAATALGRLEFGDDGTPKVLTADG
KPMIGNGADHGATLSDLAKELADAKPYAVRDGGKGGGGKQPGSQSGTPAHSNPILAQVPGLADLPEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23829; Mature: 23829

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIELTDLSGLPEGLKSVVESEGDKHTLDLSKLMPSEDLTGLKSALQKERENARAWEKFG
CEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
KPDELEAKLSELEKKAQGTGKAAEDAQAKLDALKAEYDGKLSDKDKRIEIMMKANASESL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHH
KAELAKAGFIPEAIDDIAATALGRLEFGDDGTPKVLTADGKPMIGNGADHGATLSDLAKE
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
LADAKPYAVRDGGKGGGGKQPGSQSGTPAHSNPILAQVPGLADLPEK
HHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MKIELTDLSGLPEGLKSVVESEGDKHTLDLSKLMPSEDLTGLKSALQKERENARAWEKFG
CEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
KPDELEAKLSELEKKAQGTGKAAEDAQAKLDALKAEYDGKLSDKDKRIEIMMKANASESL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHH
KAELAKAGFIPEAIDDIAATALGRLEFGDDGTPKVLTADGKPMIGNGADHGATLSDLAKE
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
LADAKPYAVRDGGKGGGGKQPGSQSGTPAHSNPILAQVPGLADLPEK
HHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA