| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080631
Identifier: 99080631
GI number: 99080631
Start: 842213
End: 842701
Strand: Direct
Name: 99080631
Synonym: TM1040_0790
Alternate gene names: NA
Gene position: 842213-842701 (Clockwise)
Preceding gene: 99080616
Following gene: 99080632
Centisome position: 26.31
GC content: 59.1
Gene sequence:
>489_bases ATGAGGTTGCCCAGCATGGCAAACCAGCGAACTTACCTCCACACGCTGATCCGCGGCCTCGTGGTCAGGCACTTCCCAGG CAAGCAGAATTGCGCCGCTCGCGAAATCGCTGAGTTCTGGGCAGGTCATGCCTTGGAGGACTCTGAGGTCGATTTTGGTG GGTTTTCTCGCAAGATGAACGGATCTCGCGCCTTCGATGTTTATGACCTGTTCGCGCTTATCCAAATCACAGGTGACAAG CGCCCCATCGCAGCTTTCGGCGATGTGCAGGAGGGGAACGTTCCTCCGAGTATTCCAATGCCGGTTCTTGCAGCTCGTGC GGCCAAGGAGTCTGGCGAGGCAGTCTCCGCAGCAATCGAAGGCGGTGATCTTGGCGAGATCGCGATGGAGGCTGGCGAGG CAGAGGCAGCACACCGGGAAATTCGGGAGAATGCGGAAGCTGCCATTCGCGCTTCATCGGGCGGCGTCACCCCCATCAGA AAGGCCTGA
Upstream 100 bases:
>100_bases CCCAAAGCACGACGCACCTTCGGCCGCCTAACCCGCTCTCTATGCCAAATACCGCACCCATACATTCAAGTTGGGCGCGG AGGACTGAAATACCAAAGCA
Downstream 100 bases:
>100_bases GACATGGCTGATCCGGTACGCGGCGGCAGCGTGAAACTCGAAGGCGAAGATCTGGTCATCCGCATGCCGAAGGACCGAGC GCAGAGCTTGCGTGTCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRLPSMANQRTYLHTLIRGLVVRHFPGKQNCAAREIAEFWAGHALEDSEVDFGGFSRKMNGSRAFDVYDLFALIQITGDK RPIAAFGDVQEGNVPPSIPMPVLAARAAKESGEAVSAAIEGGDLGEIAMEAGEAEAAHREIRENAEAAIRASSGGVTPIR KA
Sequences:
>Translated_162_residues MRLPSMANQRTYLHTLIRGLVVRHFPGKQNCAAREIAEFWAGHALEDSEVDFGGFSRKMNGSRAFDVYDLFALIQITGDK RPIAAFGDVQEGNVPPSIPMPVLAARAAKESGEAVSAAIEGGDLGEIAMEAGEAEAAHREIRENAEAAIRASSGGVTPIR KA >Mature_162_residues MRLPSMANQRTYLHTLIRGLVVRHFPGKQNCAAREIAEFWAGHALEDSEVDFGGFSRKMNGSRAFDVYDLFALIQITGDK RPIAAFGDVQEGNVPPSIPMPVLAARAAKESGEAVSAAIEGGDLGEIAMEAGEAEAAHREIRENAEAAIRASSGGVTPIR KA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17318; Mature: 17318
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPSMANQRTYLHTLIRGLVVRHFPGKQNCAAREIAEFWAGHALEDSEVDFGGFSRKMN CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GSRAFDVYDLFALIQITGDKRPIAAFGDVQEGNVPPSIPMPVLAARAAKESGEAVSAAIE CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC GGDLGEIAMEAGEAEAAHREIRENAEAAIRASSGGVTPIRKA CCCHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC >Mature Secondary Structure MRLPSMANQRTYLHTLIRGLVVRHFPGKQNCAAREIAEFWAGHALEDSEVDFGGFSRKMN CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GSRAFDVYDLFALIQITGDKRPIAAFGDVQEGNVPPSIPMPVLAARAAKESGEAVSAAIE CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC GGDLGEIAMEAGEAEAAHREIRENAEAAIRASSGGVTPIRKA CCCHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA